RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 CACNA2D3Q8IZS8 1091 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 BMPERQ8N8U9 685 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 CCDC89Q8N998 374 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 RASGEF1AQ8N9B8 481 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 GLIS1Q8NBF1 620 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 AVL9Q8NBF6 648 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 CLEC18CQ8NCF0 446 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 AGBL5Q8NDL9 886 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 ZNF398Q8TD17 642 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 PDLIM2Q96JY6 352 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 SPRY4Q9C004 299 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 STN1Q9H668 368 aaKnown RBP15.49■□□□□ 0.07
GARNL3-215ENST00000478702 ETNK1Q9HBU6 452 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 TUBD1Q9UJT1 453 aa15.49■□□□□ 0.07
GARNL3-215ENST00000478702 USP9YO00507 2555 aaPredicted RBP15.48■□□□□ 0.07
GARNL3-215ENST00000478702 OR5K4A6NMS3 321 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 H7C0S8 307 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 CCL22O00626 93 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 CEP104O60308 925 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 RAD1O60671 282 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 ETS1P14921 441 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 ITGALP20701 1170 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 AKT1P31749 480 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 CXCR5P32302 372 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 GPLD1P80108 840 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 FOXK1P85037 733 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 DMPKQ09013 629 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 CDH17Q12864 832 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 SEPT6Q14141 434 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 POU6F1Q14863 301 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 ANKS6Q68DC2 871 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 PRUNE1Q86TP1 453 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 SLC9B2Q86UD5 537 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 ZNF761Q86XN6 746 aaPredicted RBP15.48■□□□□ 0.07
GARNL3-215ENST00000478702 REXO1L1PQ8IX06 675 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 ULK4Q96C45 1275 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 TTC25Q96NG3 672 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 ASB8Q9H765 288 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 PRDM8Q9NQV8 689 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 NLE1Q9NVX2 485 aaPredicted RBP15.48■□□□□ 0.07
GARNL3-215ENST00000478702 PIH1D1Q9NWS0 290 aaKnown RBP15.48■□□□□ 0.07
GARNL3-215ENST00000478702 SLC39A1Q9NY26 324 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 KCNK4Q9NYG8 393 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 PAK5Q9P286 719 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 PILRAQ9UKJ1 303 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 DNAJC16Q9Y2G8 782 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 JRKLQ9Y4A0 524 aa15.48■□□□□ 0.07
GARNL3-215ENST00000478702 TRBV23OR9-2A0A075B6M9 112 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 LILRA5A6NI73 299 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 OR2AG2A6NM03 316 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 B4E171 279 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 NKX2-8O15522 239 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 ZSCAN12O43309 604 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 DUX1O43812 170 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 KCNJ13O60928 360 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 TPH1P17752 444 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 VCLP18206 1134 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 MSH3P20585 1137 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 PSMA3P25788 255 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 CSTF2P33240 577 aaKnown RBP eCLIP15.47■□□□□ 0.07
GARNL3-215ENST00000478702 CASRP41180 1078 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 TSPAN7P41732 249 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 CCR10P46092 362 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 EPHA4P54764 986 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 TMPRSS15P98073 1019 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 SEPT7Q16181 437 aaKnown RBP15.47■□□□□ 0.07
GARNL3-215ENST00000478702 LONRF2Q1L5Z9 754 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 AGAP9Q5VTM2 703 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 TMEM71Q6P5X7 295 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 SNX20Q7Z614 316 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 NXPE1Q8N323 547 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 OR52K1Q8NGK4 314 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 ZNF514Q96K75 400 aaPredicted RBP15.47■□□□□ 0.07
GARNL3-215ENST00000478702 SLC38A3Q99624 504 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 DPYSL5Q9BPU6 564 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 RAB6BQ9NRW1 208 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 SCHIP1Q9P0W5 487 aaPredicted RBP15.47■□□□□ 0.07
GARNL3-215ENST00000478702 PDP2Q9P2J9 529 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 CPNE7Q9UBL6 633 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 CRLS1Q9UJA2 301 aa15.47■□□□□ 0.07
GARNL3-215ENST00000478702 DRG1Q9Y295 367 aaKnown RBP15.47■□□□□ 0.07
GARNL3-215ENST00000478702 USP9XQ93008 2570 aaPredicted RBP15.47■□□□□ 0.07
GARNL3-215ENST00000478702 TNRC6AQ8NDV7 1962 aaKnown RBP15.47■□□□□ 0.07
GARNL3-215ENST00000478702 ICE1Q9Y2F5 2266 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 TRBV5-4A0A0C4DH59 114 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 LOC101059948A0A1B0GTJ6 334 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 MROH6A6NGR9 719 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 EFCAB7A8K855 629 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 ZNF891A8MT65 544 aaPredicted RBP15.46■□□□□ 0.07
GARNL3-215ENST00000478702 PDZK1P1A8MUH7 402 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 E7EVH7 732 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 ZSCAN5DPP0CG00 497 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 BRAFP15056 766 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 XRCC1P18887 633 aaPredicted RBP15.46■□□□□ 0.07
GARNL3-215ENST00000478702 MC4RP32245 332 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 RPL22P35268 128 aaKnown RBP15.46■□□□□ 0.07
GARNL3-215ENST00000478702 BCL7AQ4VC05 210 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 ABRAXAS1Q6UWZ7 409 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 WASH2PQ6VEQ5 465 aa15.46■□□□□ 0.07
GARNL3-215ENST00000478702 PPP1R21Q6ZMI0 780 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms