RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CARD16Q5EG05 197 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 ATXN7L2Q5T6C5 722 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-207ENST00000477676 FAM72AQ5TYM5 149 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 MANEALQ5VSG8 457 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 HIST2H2BCQ6DN03 193 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 FAM72DQ6L9T8 149 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 KIAA1161Q6NSJ0 714 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 LEKR1Q6ZMV7 388 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 C11orf57Q6ZUT1 292 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-207ENST00000477676 RAB11FIP2Q7L804 512 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 SLC26A9Q7LBE3 791 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 VPS36Q86VN1 386 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 FAM72BQ86X60 149 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 PELI3Q8N2H9 469 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 FBXO39Q8N4B4 442 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 ANKRD53Q8N9V6 530 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 C1orf131Q8NDD1 294 aaKnown RBP4.61□□□□□ -1.67
CKS1B-207ENST00000477676 ZNF397Q8NF99 534 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-207ENST00000477676 NTN5Q8WTR8 489 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-207ENST00000477676 SLC25A43Q8WUT9 341 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-207ENST00000477676 SHC3Q92529 594 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 DLG3Q92796 817 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 TSACCQ96A04 125 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-207ENST00000477676 GRAMD1AQ96CP6 724 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 PGAP3Q96FM1 320 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-207ENST00000477676 ZNF764Q96H86 408 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-207ENST00000477676 FEM1CQ96JP0 617 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 NSMCE3Q96MG7 304 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 IL12RB2Q99665 862 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 TSG101Q99816 390 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 SEMA3CQ99985 751 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 HEPHQ9BQS7 1158 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 CPEB1Q9BZB8 566 aaKnown RBP4.61□□□□□ -1.67
CKS1B-207ENST00000477676 GTPBP4Q9BZE4 634 aaKnown RBP4.61□□□□□ -1.67
CKS1B-207ENST00000477676 TM6SF2Q9BZW4 377 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 ZDHHC6Q9H6R6 413 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 PLCB1Q9NQ66 1216 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 ACSS2Q9NR19 701 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 PTGFRNQ9P2B2 879 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 ANKMY1Q9P2S6 941 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 APOBEC3BQ9UH17 382 aaKnown RBP4.61□□□□□ -1.67
CKS1B-207ENST00000477676 SLC12A6Q9UHW9 1150 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 MAN1B1Q9UKM7 699 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 PADI4Q9UM07 663 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 COQ6Q9Y2Z9 468 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 PCDHGA7Q9Y5G6 932 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 FER1L5A0AVI2 2057 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 ANKRD12Q6UB98 2062 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 PIKFYVEQ9Y2I7 2098 aa4.61□□□□□ -1.67
CKS1B-207ENST00000477676 ITPR3Q14573 2671 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 DOCK10Q96BY6 2186 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 POLEQ07864 2286 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 PCNX1Q96RV3 2341 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 C2CD3Q4AC94 2353 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 ILVBLA1L0T0 632 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 MASP2O00187 686 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 FOXN3O00409 490 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-207ENST00000477676 FPGTO14772 594 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 NVLO15381 856 aaKnown RBP4.6□□□□□ -1.67
CKS1B-207ENST00000477676 B4GAT1O43505 415 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 SRGAP2O75044 1071 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 AFPP02771 609 aaKnown RBP4.6□□□□□ -1.67
CKS1B-207ENST00000477676 RPLP0P05388 317 aaKnown RBP4.6□□□□□ -1.67
CKS1B-207ENST00000477676 UGT2B4P06133 528 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 LIPCP11150 499 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 CCL4P13236 92 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 GM2AP17900 193 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 OR1E1P30953 314 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 CCKBRP32239 447 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 GABRB2P47870 512 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 DNA2P51530 1060 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 RNASE9P60153 205 aaKnown RBP4.6□□□□□ -1.67
CKS1B-207ENST00000477676 KRT83P78385 493 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 GNA12Q03113 381 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 SPIDRQ14159 915 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 C16orf72Q14CZ0 275 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 IRF4Q15306 451 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 KLHL40Q2TBA0 621 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 WSCD2Q2TBF2 565 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 CCDC40Q4G0X9 1142 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 ZNF805Q5CZA5 627 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 EFHC1Q5JVL4 640 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 FKBP15Q5T1M5 1219 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 FAXCQ5TGI0 409 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 KLHL10Q6JEL2 608 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 TRIM65Q6PJ69 517 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 FOXR2Q6PJQ5 311 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 MACC1Q6ZN28 852 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 SETD3Q86TU7 594 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-207ENST00000477676 SLC47A2Q86VL8 602 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 NLRP14Q86W24 1093 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 XYLT1Q86Y38 959 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 DRC7Q8IY82 874 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 ARL14Q8N4G2 192 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 PCDH20Q8N6Y1 951 aaKnown RBP4.6□□□□□ -1.67
CKS1B-207ENST00000477676 Q8N9G6 341 aaPredicted RBP4.6□□□□□ -1.67
CKS1B-207ENST00000477676 PLA2G15Q8NCC3 412 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 DENND6BQ8NEG7 585 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 GPR156Q8NFN8 814 aa4.6□□□□□ -1.67
CKS1B-207ENST00000477676 CCL4L1Q8NHW4 92 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms