RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 CNOT6Q9ULM6 557 aaKnown RBP10.88□□□□□ -0.67
COL27A1-204ENST00000477421 SAMHD1Q9Y3Z3 626 aaKnown RBP10.88□□□□□ -0.67
COL27A1-204ENST00000477421 FAM20BO75063 409 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 RECQL5O94762 991 aaPredicted RBP10.87□□□□□ -0.67
COL27A1-204ENST00000477421 COL6A1P12109 1028 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 MYCLP1P12525 358 aaPredicted RBP10.87□□□□□ -0.67
COL27A1-204ENST00000477421 FOXA1P55317 472 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 PTGR1Q14914 329 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 MPPE1Q53F39 396 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 PDSS2Q86YH6 399 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 TBC1D21Q8IYX1 336 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 B4GALNT2Q8NHY0 566 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 PTERQ96BW5 349 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 PGAP3Q96FM1 320 aaPredicted RBP10.87□□□□□ -0.67
COL27A1-204ENST00000477421 C1orf74Q96LT6 269 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 ADI1Q9BV57 179 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 FAM83DQ9H4H8 585 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 SCHIP1Q9P0W5 487 aaPredicted RBP10.87□□□□□ -0.67
COL27A1-204ENST00000477421 CLCA2Q9UQC9 943 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 ASF1AQ9Y294 204 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 USP3Q9Y6I4 520 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 I6L893 689 aaPredicted RBP10.87□□□□□ -0.67
COL27A1-204ENST00000477421 ARPC2O15144 300 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 ADAM12O43184 909 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 FTH1P02794 183 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 LINGO3P0C6S8 592 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 CYP2A6P11509 494 aaPredicted RBP10.87□□□□□ -0.67
COL27A1-204ENST00000477421 EPORP19235 508 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 RPS9P46781 194 aaKnown RBP10.87□□□□□ -0.67
COL27A1-204ENST00000477421 UBE3AQ05086 875 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 C18orf21Q32NC0 220 aaPredicted RBP10.87□□□□□ -0.67
COL27A1-204ENST00000477421 CNPY1Q3B7I2 92 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 NADK2Q4G0N4 442 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 CYP20A1Q6UW02 462 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 MBOAT1Q6ZNC8 495 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 TAS1R1Q7RTX1 841 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 RAB42Q8N4Z0 105 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 AURKBQ96GD4 344 aaPredicted RBP10.87□□□□□ -0.67
COL27A1-204ENST00000477421 MRPS26Q9BYN8 205 aaKnown RBP10.87□□□□□ -0.67
COL27A1-204ENST00000477421 REEP1Q9H902 201 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 NUMBLQ9Y6R0 609 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 COMMD3-BMI1R4GMX3 469 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 TTC3P53804 2025 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 PRORSD1PA6NEY8 169 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 CLDN9O95484 217 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 CD1DP15813 335 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 MAGEA3P43357 314 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 RHDQ02161 417 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 CYP4F3Q08477 520 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 LAPTM5Q13571 262 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 LDLRAP1Q5SW96 308 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 COLGALT2Q8IYK4 626 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 ZNF614Q8N883 585 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 SH3RF2Q8TEC5 729 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 CYB5D2Q8WUJ1 264 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 RORBQ92753 470 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 KIAA1191Q96A73 305 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 CENPNQ96H22 339 aaPredicted RBP10.87□□□□□ -0.67
COL27A1-204ENST00000477421 KCTD5Q9NXV2 234 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 RSL24D1Q9UHA3 163 aaKnown RBP10.87□□□□□ -0.67
COL27A1-204ENST00000477421 KCNE2Q9Y6J6 123 aa10.87□□□□□ -0.67
COL27A1-204ENST00000477421 LCHNA4D1U4 455 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 G3V2T6 193 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 M0QZQ0 153 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 SLC28A1O00337 649 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 INPPL1O15357 1258 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 BCAS2O75934 225 aaPredicted RBP10.86□□□□□ -0.67
COL27A1-204ENST00000477421 OAZ2O95190 189 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 KIR3DL1P43629 444 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 RGRP47804 291 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 AP1S1P61966 158 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 ERVK-8P63133 956 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 LAPTM4AQ15012 233 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 TRIM16LQ309B1 348 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 NUDT18Q6ZVK8 323 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 PIANPQ8IYJ0 282 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 SFRP1Q8N474 314 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 SCAMP4Q969E2 229 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 REXO5Q96IC2 774 aaKnown RBP10.86□□□□□ -0.67
COL27A1-204ENST00000477421 KATNBL1Q9H079 304 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 RAB26Q9ULW5 256 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 PHIPQ8WWQ0 1821 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 LOC730098B7Z3J9 87 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 hCG_2039718K7EN88 272 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 IFRD1O00458 451 aaPredicted RBP10.86□□□□□ -0.67
COL27A1-204ENST00000477421 STC2O76061 302 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 PRDX3P30048 256 aaKnown RBP10.86□□□□□ -0.67
COL27A1-204ENST00000477421 SLC7A1P30825 629 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 RAB41Q5JT25 222 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 OTUD1Q5VV17 481 aaPredicted RBP10.86□□□□□ -0.67
COL27A1-204ENST00000477421 UTS2BQ765I0 119 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 MAVSQ7Z434 540 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 OR52J3Q8NH60 311 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 ASZ1Q8WWH4 475 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 SLC13A3Q8WWT9 602 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 PLD4Q96BZ4 506 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 AP2M1Q96CW1 435 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 MTIF3Q9H2K0 278 aaKnown RBP10.86□□□□□ -0.67
COL27A1-204ENST00000477421 EXD2Q9NVH0 621 aa10.86□□□□□ -0.67
COL27A1-204ENST00000477421 POLR2AP24928 1970 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms