RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 TSPAN7P41732 249 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 MAPK9P45984 424 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 LEPRP48357 1165 aaKnown RBP15.23■□□□□ 0.03
COMMD6-209ENST00000477377 ACVR1Q04771 509 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 CDH17Q12864 832 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 DBN1Q16643 649 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 CAPRIN2Q6IMN6 1127 aaKnown RBP15.23■□□□□ 0.03
COMMD6-209ENST00000477377 ZNF534Q76KX8 674 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 JAMLQ86YT9 394 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 AGBL5Q8NDL9 886 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 RSC1A1Q92681 617 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 TAAR9Q96RI9 348 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 COPS8Q99627 209 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 EPB41L1Q9H4G0 881 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 PAK5Q9P286 719 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 B3GALT1Q9Y5Z6 326 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 SDK2Q58EX2 2172 aa15.23■□□□□ 0.03
COMMD6-209ENST00000477377 C17orf113A0A1B0GUU1 675 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 CCDC162PA2VCL2 907 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.22■□□□□ 0.03
COMMD6-209ENST00000477377 ANKRD34CP0C6C1 535 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 PPP1CAP62136 330 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 CXADRP78310 365 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 MC2RQ01718 297 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 CACNG1Q06432 222 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 SEPT6Q14141 434 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 ZRANB3Q5FWF4 1079 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 SNAP47Q5SQN1 464 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 TSTD2Q5T7W7 516 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 DUS1LQ6P1R4 473 aaKnown RBP15.22■□□□□ 0.03
COMMD6-209ENST00000477377 TTC27Q6P3X3 843 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 RBM12BQ8IXT5 1001 aaKnown RBP15.22■□□□□ 0.03
COMMD6-209ENST00000477377 JPH3Q8WXH2 748 aaPredicted RBP15.22■□□□□ 0.03
COMMD6-209ENST00000477377 LRRC45Q96CN5 670 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 MS4A14Q96JA4 679 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 C9orf72Q96LT7 481 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 RMDN2Q96LZ7 410 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 FCRL3Q96P31 734 aaPredicted RBP15.22■□□□□ 0.03
COMMD6-209ENST00000477377 RAB33BQ9H082 229 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 WWP1Q9H0M0 922 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 SIDT1Q9NXL6 827 aaKnown RBP15.22■□□□□ 0.03
COMMD6-209ENST00000477377 SEMA5BQ9P283 1151 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 RIMKLBQ9ULI2 386 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 CFAP20Q9Y6A4 193 aaKnown RBP15.22■□□□□ 0.03
COMMD6-209ENST00000477377 IGSF10Q6WRI0 2623 aa15.22■□□□□ 0.03
COMMD6-209ENST00000477377 ATMQ13315 3056 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 TCRBV7S3A2A0A539 114 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 EFCAB7A8K855 629 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 K7ENP7 123 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 CAPN5O15484 640 aaPredicted RBP15.21■□□□□ 0.03
COMMD6-209ENST00000477377 KIF1CO43896 1103 aaKnown RBP15.21■□□□□ 0.03
COMMD6-209ENST00000477377 APRTP07741 180 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 LIPCP11150 499 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 MTHFD1P11586 935 aaKnown RBP15.21■□□□□ 0.03
COMMD6-209ENST00000477377 WT1P19544 449 aaPredicted RBP15.21■□□□□ 0.03
COMMD6-209ENST00000477377 ADRA1DP25100 572 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 CSTF2P33240 577 aaKnown RBP eCLIP15.21■□□□□ 0.03
COMMD6-209ENST00000477377 SEMA3AQ14563 771 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 ANKS6Q68DC2 871 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 INO80CQ6PI98 192 aaPredicted RBP15.21■□□□□ 0.03
COMMD6-209ENST00000477377 GPR155Q7Z3F1 870 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 TRIM48Q8IWZ4 208 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 CFAP206Q8IYR0 622 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 CLDN19Q8N6F1 224 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 HEXDCQ8WVB3 486 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 ART4Q93070 314 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 HDAC10Q969S8 669 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 CXorf40BQ96DE9 158 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 DDA1Q9BW61 102 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 OR52A5Q9H2C5 316 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 APMAPQ9HDC9 416 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 EIF2B3Q9NR50 452 aaKnown RBP15.21■□□□□ 0.03
COMMD6-209ENST00000477377 EPHA6Q9UF33 1036 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 KLHL3Q9UH77 587 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 ACSL5Q9ULC5 683 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 TTC7AQ9ULT0 858 aaPredicted RBP15.21■□□□□ 0.03
COMMD6-209ENST00000477377 NEU2Q9Y3R4 380 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 JRKLQ9Y4A0 524 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 TCAF1Q9Y4C2 921 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 CACNA1GO43497 2377 aa15.21■□□□□ 0.03
COMMD6-209ENST00000477377 HEATR9A2RTY3 570 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 KLHL33A6NCF5 533 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 GOLGA6L3A6NEY3 463 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 GOT2P00505 430 aaKnown RBP15.2■□□□□ 0.02
COMMD6-209ENST00000477377 POLBP06746 335 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 MSNP26038 577 aaKnown RBP15.2■□□□□ 0.02
COMMD6-209ENST00000477377 CD82P27701 267 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 PDHA2P29803 388 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 HALP42357 657 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 CAPZBP47756 277 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 TMPRSS3P57727 454 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 SKIDA1Q1XH10 827 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 ARHGAP40Q5TG30 622 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 TAS2R42Q7RTR8 314 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 PLXDC1Q8IUK5 500 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 CCDC89Q8N998 374 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 DNAAF3Q8N9W5 541 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 COG1Q8WTW3 980 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 MAIP1Q8WWC4 291 aa15.2■□□□□ 0.02
COMMD6-209ENST00000477377 DCUN1D1Q96GG9 259 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms