RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 TRIM24O15164 1050 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 GPR42O15529 346 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 TTI1O43156 1089 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 STRNO43815 780 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 TBX19O60806 448 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF254O75437 659 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ERN1O75460 977 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 WBP4O75554 376 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 SURF6O75683 361 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 RHBDL1O75783 438 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CYP7B1O75881 506 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 KAT7O95251 611 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 IL18BPO95998 194 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 BCL10O95999 233 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 SERPINC1P01008 464 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 NPPAP01160 153 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 S100A6P06703 90 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CEACAM5P06731 702 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 HEXAP06865 529 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PROS1P07225 676 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 YES1P07947 543 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 FGF4P08620 206 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 DBHP09172 617 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 VSIG10L2P0DP72 767 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CALCBP10092 127 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 EPB41P11171 864 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 RALBP11234 206 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 VPREB1P12018 145 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF37AP17032 561 aaPredicted RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 HOXB9P17482 250 aaPredicted RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 GNAZP19086 355 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 TNNI3P19429 210 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CHRM3P20309 590 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ITGALP20701 1170 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CYP2A7P20853 494 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 TACR2P21452 398 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PRKACBP22694 351 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 NR2F2P24468 414 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CTNNA2P26232 953 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 HOXD9P28356 352 aaPredicted RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PPIFP30405 207 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CCR1P32246 355 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 NF2P35240 595 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 RFC2P35250 354 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 THBS2P35442 1172 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 WNT5AP41221 380 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 GLRBP48167 497 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 SUOXP51687 545 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ADCY7P51828 1080 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 METAP1P53582 386 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 MAP3K7CLP57077 242 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 TAS2R50P59544 299 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 SIRPAP78324 504 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 IRX4P78413 519 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CAP1Q01518 475 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 TNFRSF17Q02223 184 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 TAP2Q03519 686 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 MZT1Q08AG7 82 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ACSM1Q08AH1 577 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 HSPA14Q0VDF9 509 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PPP1R8Q12972 351 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 MTAPQ13126 283 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 SNTB2Q13425 540 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PDE7AQ13946 482 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 FGFBP1Q14512 234 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 IL13RA2Q14627 380 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 RNPS1Q15287 305 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 RPE65Q16518 533 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CCDC57Q2TAC2 916 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CR1LQ2VPA4 569 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 GAGE13Q4V321 117 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 TAF1BQ53T94 588 aaPredicted RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PLAC9Q5JTB6 97 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 RBM20Q5T481 1227 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 STXBP5Q5T5C0 1151 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 C1orf185Q5T7R7 199 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PRAMEF20Q5VT98 475 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 KRT40Q6A162 431 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 NAPEPLDQ6IQ20 393 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 AADACL2Q6P093 401 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 MIS18BP1Q6P0N0 1132 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ACSM6Q6P461 480 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 SLC27A1Q6PCB7 646 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CES3Q6UWW8 571 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM108Q6UXF1 575 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 KIAA1324Q6UXG2 1013 aaKnown RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 MACC1Q6ZN28 852 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 BEND4Q6ZU67 534 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 TMCO2Q7Z6W1 182 aaPredicted RBP2.86□□□□□ -1.95
HMGN4-202ENST00000477243 GPAT4Q86UL3 456 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 AACSQ86V21 672 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 TXNRD3Q86VQ6 643 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 SERPINA12Q8IW75 414 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 CFAP52Q8N1V2 620 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 PSD4Q8NDX1 1056 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 OR2T34Q8NGX1 318 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 OR52J3Q8NH60 311 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 B4GALNT2Q8NHY0 566 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ZFP28Q8NHY6 868 aa2.86□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF671Q8TAW3 534 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms