RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 KIFC1Q9BW19 673 aa13.17□□□□□ -0.3
ACTN4-205ENST00000477174 MRM3Q9HC36 420 aaKnown RBP13.17□□□□□ -0.3
ACTN4-205ENST00000477174 EPB41L5Q9HCM4 733 aa13.17□□□□□ -0.3
ACTN4-205ENST00000477174 TREX1Q9NSU2 369 aa13.17□□□□□ -0.3
ACTN4-205ENST00000477174 AKAP7Q9P0M2 348 aaPredicted RBP13.17□□□□□ -0.3
ACTN4-205ENST00000477174 PCYOX1Q9UHG3 505 aa13.17□□□□□ -0.3
ACTN4-205ENST00000477174 RAXQ9Y2V3 346 aa13.17□□□□□ -0.3
ACTN4-205ENST00000477174 SCN8AQ9UQD0 1980 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 CACNA1BQ00975 2339 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 IGHV5-10-1A0A0J9YXX1 117 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 TCRBV7S3A2A0A539 114 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 OR52A4PA6NMU1 304 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 F8W8V4 182 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 QSOX1O00391 747 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 GOT2P00505 430 aaKnown RBP13.16□□□□□ -0.3
ACTN4-205ENST00000477174 PRSS56P0CW18 603 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 RPE65Q16518 533 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 FASTKD1Q53R41 847 aaKnown RBP13.16□□□□□ -0.3
ACTN4-205ENST00000477174 AARS2Q5JTZ9 985 aaKnown RBP13.16□□□□□ -0.3
ACTN4-205ENST00000477174 PHF19Q5T6S3 580 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 ZNF449Q6P9G9 518 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 ZNF534Q76KX8 674 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 CLDN19Q8N6F1 224 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 SNIP1Q8TAD8 396 aaKnown RBP13.16□□□□□ -0.3
ACTN4-205ENST00000477174 HM13Q8TCT9 377 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 CPT1BQ92523 772 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 NCSTNQ92542 709 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 CCDC97Q96F63 343 aaPredicted RBP13.16□□□□□ -0.3
ACTN4-205ENST00000477174 RUNDC3BQ96NL0 473 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 XAB2Q9HCS7 855 aaKnown RBP13.16□□□□□ -0.3
ACTN4-205ENST00000477174 ASCL3Q9NQ33 180 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 THSD1Q9NS62 852 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 ANAPC5Q9UJX4 755 aa13.16□□□□□ -0.3
ACTN4-205ENST00000477174 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
ACTN4-205ENST00000477174 MYLKQ15746 1914 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 DSPP15924 2871 aaKnown RBP13.15□□□□□ -0.3
ACTN4-205ENST00000477174 A0A087WV48 116 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 OR51F1A6NGY5 319 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 SDR42E2A6NKP2 422 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 RRP8O43159 456 aaKnown RBP13.15□□□□□ -0.3
ACTN4-205ENST00000477174 UBXN7O94888 489 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 TNFSF15O95150 251 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 ITGA2BP08514 1039 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 MGAT1P26572 445 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 PBLDP30039 288 aaPredicted RBP13.15□□□□□ -0.3
ACTN4-205ENST00000477174 PAFAH1B1P43034 410 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 CRADDP78560 199 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 RPA4Q13156 261 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 PPP1R7Q15435 360 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 ZNF658BQ4V348 819 aaPredicted RBP13.15□□□□□ -0.3
ACTN4-205ENST00000477174 CAPRIN2Q6IMN6 1127 aaKnown RBP13.15□□□□□ -0.3
ACTN4-205ENST00000477174 CAND1Q86VP6 1230 aaKnown RBP13.15□□□□□ -0.3
ACTN4-205ENST00000477174 PLXDC1Q8IUK5 500 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 NAT14Q8WUY8 206 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 TBC1D10AQ9BXI6 508 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 B3GNT4Q9C0J1 378 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 SOX13Q9UN79 622 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 PSMD13Q9UNM6 376 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 LOXL2Q9Y4K0 774 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 PCDHGA7Q9Y5G6 932 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 COLEC10Q9Y6Z7 277 aa13.15□□□□□ -0.3
ACTN4-205ENST00000477174 CDRT15L2A8MXV6 281 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 NVLO15381 856 aaKnown RBP13.14□□□□□ -0.31
ACTN4-205ENST00000477174 CD3EAPO15446 510 aaKnown RBP13.14□□□□□ -0.31
ACTN4-205ENST00000477174 AVILO75366 819 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 FTH1P02794 183 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 POLBP06746 335 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 SLC35G4P0C7Q5 338 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 OR56A5P0C7T3 313 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 JMJD7P0C870 316 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 THRAP10827 490 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 MTHFD1P11586 935 aaKnown RBP13.14□□□□□ -0.31
ACTN4-205ENST00000477174 AMD1P17707 334 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 NDUFS1P28331 727 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 NMBRP28336 390 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 CSF2RBP32927 897 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 CSTF2P33240 577 aaKnown RBP eCLIP13.14□□□□□ -0.31
ACTN4-205ENST00000477174 EIF2S3P41091 472 aaKnown RBP13.14□□□□□ -0.31
ACTN4-205ENST00000477174 CD151P48509 253 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 PPM1FP49593 454 aaPredicted RBP13.14□□□□□ -0.31
ACTN4-205ENST00000477174 TTPAP49638 278 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 PLOD1Q02809 727 aaPredicted RBP13.14□□□□□ -0.31
ACTN4-205ENST00000477174 GPR18Q14330 331 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 KCTD19Q17RG1 926 aaPredicted RBP13.14□□□□□ -0.31
ACTN4-205ENST00000477174 ANKRD22Q5VYY1 191 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 FOXR1Q6PIV2 292 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 XKR5Q6UX68 686 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 SYDE1Q6ZW31 735 aaPredicted RBP13.14□□□□□ -0.31
ACTN4-205ENST00000477174 PCGF5Q86SE9 256 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 CLEC14AQ86T13 490 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 PPIL6Q8IXY8 311 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 MPP5Q8N3R9 675 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 NAT8LQ8N9F0 302 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 AGBL5Q8NDL9 886 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 CAPZA3Q96KX2 299 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 CCDC74BQ96LY2 380 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 INSM2Q96T92 566 aaPredicted RBP13.14□□□□□ -0.31
ACTN4-205ENST00000477174 WWP1Q9H0M0 922 aa13.14□□□□□ -0.31
ACTN4-205ENST00000477174 DDX47Q9H0S4 455 aaKnown RBP13.14□□□□□ -0.31
ACTN4-205ENST00000477174 CATSPERZQ9NTU4 200 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms