RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 MAXP61244 160 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 SMTNL2Q2TAL5 461 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 PDPK2PQ6A1A2 396 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 MARK2Q7KZI7 788 aaKnown RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 CHST15Q7LFX5 561 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 SFRP1Q8N474 314 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 PIH1D2Q8WWB5 315 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 NCSTNQ92542 709 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 SYN2Q92777 582 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 MLPHQ9BV36 600 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 CARD9Q9H257 536 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 FAM83DQ9H4H8 585 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 C7orf69Q9H7B7 122 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 UCK1Q9HA47 277 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 PCDH9Q9HC56 1237 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 RBM22Q9NW64 420 aaKnown RBP eCLIP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 PDP2Q9P2J9 529 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 ANAPC7Q9UJX3 599 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 KCND3Q9UK17 655 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 TTLL3Q9Y4R7 772 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 KCTD3Q9Y597 815 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 B3GALT1Q9Y5Z6 326 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 C1orf232A0A0U1RR37 186 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 KCNJ13O60928 360 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 VIPP01282 170 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 SERPING1P05155 500 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 F3P13726 295 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 LIFP15018 202 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 AMD1P17707 334 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 ITGB6P18564 788 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 LHCGRP22888 699 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 POLD2P49005 469 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 CLCNKAP51800 687 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 STC1P52823 247 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 GTF2H3Q13889 308 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 PAFAH1B3Q15102 231 aaKnown RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 ZNF569Q5MCW4 686 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 NKAIN2Q5VXU1 208 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 KLHL35Q6PF15 583 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 PAOXQ6QHF9 649 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 BZW1Q7L1Q6 419 aaKnown RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 ZNF571Q7Z3V5 609 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 TMC3Q7Z5M5 1100 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 ARFGAP1Q8N6T3 406 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 SLC37A2Q8TED4 501 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 THAP3Q8WTV1 239 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 JPH3Q8WXH2 748 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 COX14Q96I36 57 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 Q96M66 194 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 TSGA13Q96PP4 275 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 LYSMD1Q96S90 227 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 ZNF670Q9BS34 389 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 SYT11Q9BT88 431 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 FUCA2Q9BTY2 467 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 ZSCAN5AQ9BUG6 496 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 RIOK2Q9BVS4 552 aaKnown RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 MAK16Q9BXY0 300 aaKnown RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 PCDH18Q9HCL0 1135 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 CD84Q9UIB8 345 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 G3BP2Q9UN86 482 aaKnown RBP7.17□□□□□ -1.26
BRCA1-214ENST00000477152 TMEM98Q9Y2Y6 226 aa7.17□□□□□ -1.26
BRCA1-214ENST00000477152 ZNF462Q96JM2 2506 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 SDK2Q58EX2 2172 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 A0A1W2PQJ5 194 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 LILRA5A6NI73 299 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 A8MU76 341 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 MKRN2OSH3BPM6 223 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 DDX3XO00571 662 aaKnown RBP eCLIP7.16□□□□□ -1.261e-8■■■□□ 17.6
BRCA1-214ENST00000477152 GRID2O43424 1007 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 SNX2O60749 519 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 ANKRD34CP0C6C1 535 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 ZFXP17010 805 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-214ENST00000477152 CASRP41180 1078 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 MAPK9P45984 424 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 TLE1Q04724 770 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 GALNT2Q10471 571 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 CDC20Q12834 499 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 NFATC2Q13469 925 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 IL11RAQ14626 422 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-214ENST00000477152 ZDHHC20Q5W0Z9 365 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 ANKS6Q68DC2 871 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 IYDQ6PHW0 289 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 FAM214BQ7L5A3 538 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 TMPRSS9Q7Z410 1059 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 PGBD5Q8N414 524 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 CCNYQ8ND76 341 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 LPCAT1Q8NF37 534 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 MAML1Q92585 1016 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 RTP4Q96DX8 246 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 ZDHHC12Q96GR4 267 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 NUP85Q9BW27 656 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 TDRD1Q9BXT4 1180 aaKnown RBP7.16□□□□□ -1.26
BRCA1-214ENST00000477152 PRDM14Q9GZV8 571 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 GP6Q9HCN6 339 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 UVRAGQ9P2Y5 699 aa7.16□□□□□ -1.26
BRCA1-214ENST00000477152 TMEM184BQ9Y519 407 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-214ENST00000477152 KMOO15229 486 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms