RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 TLK1Q9UKI8 766 aa8.29□□□□□ -1.08
VAPB-205ENST00000476395 TTC34A8MYJ7 566 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 NR5A2O00482 541 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 IDH3BO43837 385 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 NOBOXO60393 691 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 ZNF254O75437 659 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 RFPL2O75678 378 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 ATXN1LP0C7T5 689 aaKnown RBP8.28□□□□□ -1.08
VAPB-205ENST00000476395 PRKACBP22694 351 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 FASP25445 335 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 ZNF135P52742 658 aaPredicted RBP8.28□□□□□ -1.08
VAPB-205ENST00000476395 GALK2Q01415 458 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 FUT11Q495W5 492 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 TIGD5Q53EQ6 642 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 Q5BKY6 102 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 COLEC12Q5KU26 742 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 INTS11Q5TA45 600 aaKnown RBP8.28□□□□□ -1.08
VAPB-205ENST00000476395 STEAP3Q658P3 488 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 CCDC81Q6ZN84 652 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 RBM23Q86U06 439 aaKnown RBP8.28□□□□□ -1.08
VAPB-205ENST00000476395 CILP2Q8IUL8 1156 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 ARMC8Q8IUR7 673 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 OR6J1Q8NGC5 347 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 BIRC7Q96CA5 298 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 NECTIN4Q96NY8 510 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 KCNA7Q96RP8 456 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 TTYH2Q9BSA4 534 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 EFHD1Q9BUP0 239 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 UPF3AQ9H1J1 476 aaKnown RBP8.28□□□□□ -1.08
VAPB-205ENST00000476395 RMND5AQ9H871 391 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 TBC1D13Q9NVG8 400 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 THG1LQ9NWX6 298 aaKnown RBP8.28□□□□□ -1.08
VAPB-205ENST00000476395 PKD2L2Q9NZM6 624 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 PCDHB3Q9Y5E6 796 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 PCDHA9Q9Y5H5 950 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 A0A087X1B8 175 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 LRRC72A6NJI9 287 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 DFFAO00273 331 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 MTSS1O43312 755 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 ASNA1O43681 348 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 TTKP33981 857 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 ALDH7A1P49419 539 aaKnown RBP8.28□□□□□ -1.08
VAPB-205ENST00000476395 POU4F1Q01851 419 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 PTPRCAPQ14761 206 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 OR4D1Q15615 310 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 NDUFA5Q16718 116 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 UPP1Q16831 310 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 LAIR2Q6ISS4 152 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 USP51Q70EK9 711 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 FRA10AC1Q70Z53 315 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 PAGE2Q7Z2X7 111 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 RNF135Q8IUD6 432 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 NUDT8Q8WV74 236 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 LPPQ93052 612 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 MYLPFQ96A32 169 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 TMEM74Q96NL1 305 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 AKTIPQ9H8T0 292 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 NMUR1Q9HB89 426 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 SLAMF8Q9P0V8 285 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 BAG5Q9UL15 447 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 ARHGAP33O14559 1287 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 ARPC2O15144 300 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 IRAK2O43187 625 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 LDB2O43679 373 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 B4GALT3O60512 393 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 TMCC2O75069 709 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 UGT2B11O75310 529 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 PAGE1O75459 146 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 SRP72O76094 671 aaKnown RBP8.28□□□□□ -1.08
VAPB-205ENST00000476395 ITGB1P05556 798 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 PRR35P0CG20 571 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 PRSS56P0CW18 603 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 IMPDH1P20839 514 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 SLC6A2P23975 617 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 CRHBPP24387 322 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 ADARB1P78563 741 aaKnown RBP8.28□□□□□ -1.08
VAPB-205ENST00000476395 NFKB2Q00653 900 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 LAPTM5Q13571 262 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 PCBP1Q15365 356 aaKnown RBP eCLIP8.28□□□□□ -1.08
VAPB-205ENST00000476395 PSMD5Q16401 504 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 PCSK7Q16549 785 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 TMTC4Q5T4D3 741 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 PIK3R6Q5UE93 754 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 NXNL2Q5VZ03 156 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 GPR142Q7Z601 462 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 SPRED1Q7Z699 444 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 DNAJB14Q8TBM8 379 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 PHF21BQ96EK2 531 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 SLC30A3Q99726 388 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 SMURF2Q9HAU4 748 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 DDX28Q9NUL7 540 aaKnown RBP8.28□□□□□ -1.08
VAPB-205ENST00000476395 FKBP14Q9NWM8 211 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 NSMCE4AQ9NXX6 385 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 MPP6Q9NZW5 540 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 ATPIF1Q9UII2 106 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 UTS2RQ9UKP6 389 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 SCN10AQ9Y5Y9 1956 aa8.28□□□□□ -1.08
VAPB-205ENST00000476395 TRPC5OSA6NMA1 111 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 J3KR12 359 aa8.27□□□□□ -1.08
VAPB-205ENST00000476395 RGS13O14921 159 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms