RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 CDK16Q00536 496 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 CFHR1Q03591 330 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 PPP1R7Q15435 360 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 RPE65Q16518 533 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 CYP1B1Q16678 543 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 METRNLQ641Q3 311 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 LRRC8BQ6P9F7 803 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 ZNF449Q6P9G9 518 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 AFTPHQ6ULP2 937 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 LILRA3Q8N6C8 439 aaPredicted RBP11.36□□□□□ -0.59
BRD9-203ENST00000475706 CLDN19Q8N6F1 224 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 OTUD6BQ8N6M0 293 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 OR4D9Q8NGE8 314 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 OR13J1Q8NGT2 312 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 OR2L2Q8NH16 312 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 OR4L1Q8NH43 312 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 HM13Q8TCT9 377 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 JPH3Q8WXH2 748 aaPredicted RBP11.36□□□□□ -0.59
BRD9-203ENST00000475706 C12orf66Q96MD2 445 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 INSM2Q96T92 566 aaPredicted RBP11.36□□□□□ -0.59
BRD9-203ENST00000475706 TTC1Q99614 292 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 NAPGQ99747 312 aaPredicted RBP11.36□□□□□ -0.59
BRD9-203ENST00000475706 CCM2Q9BSQ5 444 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 IL22Q9GZX6 179 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 DDX47Q9H0S4 455 aaKnown RBP11.36□□□□□ -0.59
BRD9-203ENST00000475706 ASCL3Q9NQ33 180 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 POT1Q9NUX5 634 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 IMP3Q9NV31 184 aaKnown RBP11.36□□□□□ -0.59
BRD9-203ENST00000475706 SYBUQ9NX95 663 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 ACSL5Q9ULC5 683 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 RIMKLBQ9ULI2 386 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 PRSS21Q9Y6M0 314 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.36□□□□□ -0.59
BRD9-203ENST00000475706 PCM1Q15154 2024 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 ANKRD12Q6UB98 2062 aa11.36□□□□□ -0.59
BRD9-203ENST00000475706 SDK2Q58EX2 2172 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.35□□□□□ -0.59
BRD9-203ENST00000475706 IGLV3-16A0A075B6K0 115 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 CTAGE9A4FU28 777 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 GOLGA8MH3BSY2 632 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 DXOO77932 396 aaKnown RBP11.35□□□□□ -0.59
BRD9-203ENST00000475706 UBXN7O94888 489 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 SLC35G4P0C7Q5 338 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 PSMA3P25788 255 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 NMBRP28336 390 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 CSTF2P33240 577 aaKnown RBP eCLIP11.35□□□□□ -0.59
BRD9-203ENST00000475706 PPARGP37231 505 aaPredicted RBP11.35□□□□□ -0.59
BRD9-203ENST00000475706 EIF2S3P41091 472 aaKnown RBP11.35□□□□□ -0.59
BRD9-203ENST00000475706 ETV5P41161 510 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 NSG1P42857 185 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 FNTAP49354 379 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 ERVPABLB-1P60509 514 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 SQSTM1Q13501 440 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 TRA2AQ13595 282 aaKnown RBP eCLIP11.35□□□□□ -0.59
BRD9-203ENST00000475706 GPR18Q14330 331 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 KRT33BQ14525 404 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 ITIH4Q14624 930 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 KCNJ11Q14654 390 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 PLCL1Q15111 1095 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 LYPLAL1Q5VWZ2 237 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 ANKRD22Q5VYY1 191 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 DUS1LQ6P1R4 473 aaKnown RBP11.35□□□□□ -0.59
BRD9-203ENST00000475706 CASC4Q6P4E1 433 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 CES3Q6UWW8 571 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 LDB1Q86U70 411 aaPredicted RBP11.35□□□□□ -0.59
BRD9-203ENST00000475706 ZNF248Q8NDW4 579 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 GPR150Q8NGU9 434 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 SNIP1Q8TAD8 396 aaKnown RBP11.35□□□□□ -0.59
BRD9-203ENST00000475706 CPT1BQ92523 772 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 USP7Q93009 1102 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 TMEM159Q96B96 161 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 LINC00615Q96LM1 132 aaPredicted RBP11.35□□□□□ -0.59
BRD9-203ENST00000475706 EPB41L1Q9H4G0 881 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 COG4Q9H9E3 785 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 VPS37BQ9H9H4 285 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 UCK1Q9HA47 277 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 CATSPERZQ9NTU4 200 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 SPEGQ15772 3267 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 SNRNP200O75643 2136 aaKnown RBP11.35□□□□□ -0.59
BRD9-203ENST00000475706 SPTBP11277 2137 aa11.35□□□□□ -0.59
BRD9-203ENST00000475706 PTPRQQ9UMZ3 2332 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 KLHL33A6NCF5 533 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 AVILO75366 819 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 AP2A2O94973 939 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 ITGA2BP08514 1039 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 OR56A5P0C7T3 313 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 THRAP10827 490 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 MTHFD1P11586 935 aaKnown RBP11.34□□□□□ -0.59
BRD9-203ENST00000475706 CCL4P13236 92 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 ITGB6P18564 788 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 ITPKBP27987 946 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 SLC5A2P31639 672 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 ACVR1Q04771 509 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 SEMA3AQ14563 771 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 BRD3Q15059 726 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 COL28A1Q2UY09 1125 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 PAPD7Q5XG87 772 aaKnown RBP11.34□□□□□ -0.59
BRD9-203ENST00000475706 IGF2-ASQ6U949 168 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 ZNF534Q76KX8 674 aa11.34□□□□□ -0.59
BRD9-203ENST00000475706 FAM129CQ86XR2 697 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms