RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 KCNC3Q14003 757 aa5.94□□□□□ -1.46
SMC5-203ENST00000475540 MAPRE1Q15691 268 aaKnown RBP5.94□□□□□ -1.46
SMC5-203ENST00000475540 C1orf122Q6ZSJ8 110 aa5.94□□□□□ -1.46
SMC5-203ENST00000475540 ANO5Q75V66 913 aa5.94□□□□□ -1.46
SMC5-203ENST00000475540 PCGF5Q86SE9 256 aa5.94□□□□□ -1.46
SMC5-203ENST00000475540 TRPT1Q86TN4 253 aaKnown RBP5.94□□□□□ -1.46
SMC5-203ENST00000475540 GALNT13Q8IUC8 556 aa5.94□□□□□ -1.46
SMC5-203ENST00000475540 MCEMP1Q8IX19 187 aa5.94□□□□□ -1.46
SMC5-203ENST00000475540 ZNF473Q8WTR7 871 aaKnown RBP5.94□□□□□ -1.46
SMC5-203ENST00000475540 CCDC34Q96HJ3 373 aa5.94□□□□□ -1.46
SMC5-203ENST00000475540 TIGD1Q96MW7 591 aa5.94□□□□□ -1.46
SMC5-203ENST00000475540 SRSF8Q9BRL6 282 aaKnown RBP5.94□□□□□ -1.46
SMC5-203ENST00000475540 ZNF624Q9P2J8 865 aaPredicted RBP5.94□□□□□ -1.46
SMC5-203ENST00000475540 EXO1Q9UQ84 846 aaKnown RBP5.94□□□□□ -1.46
SMC5-203ENST00000475540 CDRT15L2A8MXV6 281 aa5.93□□□□□ -1.46
SMC5-203ENST00000475540 NDUFS4O43181 175 aa5.93□□□□□ -1.46
SMC5-203ENST00000475540 SYNCRIPO60506 623 aaKnown RBP5.93□□□□□ -1.46
SMC5-203ENST00000475540 GNAZP19086 355 aa5.93□□□□□ -1.46
SMC5-203ENST00000475540 CAPN3P20807 821 aa5.93□□□□□ -1.46
SMC5-203ENST00000475540 HADHAP40939 763 aa5.93□□□□□ -1.46
SMC5-203ENST00000475540 MMP15P51511 669 aa5.93□□□□□ -1.46
SMC5-203ENST00000475540 MRPS5P82675 430 aaKnown RBP5.93□□□□□ -1.46
SMC5-203ENST00000475540 FAM109BQ6ICB4 259 aaPredicted RBP5.93□□□□□ -1.46
SMC5-203ENST00000475540 RBMS3Q6XE24 437 aaKnown RBP5.93□□□□□ -1.46
SMC5-203ENST00000475540 HGH1Q9BTY7 390 aa5.93□□□□□ -1.46
SMC5-203ENST00000475540 BARHL1Q9BZE3 327 aa5.93□□□□□ -1.46
SMC5-203ENST00000475540 SYNCQ9H7C4 482 aa5.93□□□□□ -1.46
SMC5-203ENST00000475540 DNAJB4Q9UDY4 337 aa5.93□□□□□ -1.46
SMC5-203ENST00000475540 ACAD8Q9UKU7 415 aa5.93□□□□□ -1.46
SMC5-203ENST00000475540 PCDHGA5Q9Y5G8 931 aa5.93□□□□□ -1.46
SMC5-203ENST00000475540 KIF26BQ2KJY2 2108 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 DUXAA6NLW8 204 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 CLIC2O15247 247 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 ZG16O60844 167 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 CGAP01215 116 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 HSP90AA1P07900 732 aaKnown RBP5.92□□□□□ -1.46
SMC5-203ENST00000475540 RXRGP48443 463 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 ATP12AP54707 1039 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 TMEM30BQ3MIR4 351 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 ZNF876PQ49A33 203 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 FASTKD5Q7L8L6 764 aaKnown RBP5.92□□□□□ -1.46
SMC5-203ENST00000475540 WDSUB1Q8N9V3 476 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 FCAMRQ8WWV6 532 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 WBP2Q969T9 261 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 LGALS12Q96DT0 336 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 PSD2Q9BQI7 771 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 RBM4Q9BWF3 364 aaKnown RBP5.92□□□□□ -1.46
SMC5-203ENST00000475540 MIOSQ9NXC5 875 aa5.92□□□□□ -1.46
SMC5-203ENST00000475540 TEX13DA0A0J9YY54 714 aaPredicted RBP5.91□□□□□ -1.46
SMC5-203ENST00000475540 LRRC72A6NJI9 287 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 VILLO15195 856 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 GPR137BO60478 399 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 LDLRP01130 860 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 BDNFP23560 247 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 NMBRP28336 390 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 CHRNB4P30926 498 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 GARSP41250 739 aaKnown RBP5.91□□□□□ -1.46
SMC5-203ENST00000475540 NR0B1P51843 470 aaKnown RBP5.91□□□□□ -1.46
SMC5-203ENST00000475540 KRT33BQ14525 404 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 ZC2HC1CQ53FD0 456 aaPredicted RBP5.91□□□□□ -1.46
SMC5-203ENST00000475540 KLC3Q6P597 504 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 GPALPP1Q8IXQ4 340 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 TBC1D16Q8TBP0 767 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 SAT2Q96F10 170 aaPredicted RBP5.91□□□□□ -1.46
SMC5-203ENST00000475540 CHCHD6Q9BRQ6 235 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 ECHDC1Q9NTX5 307 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 ADPRHL2Q9NX46 363 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 AMACRQ9UHK6 382 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 C2CD2Q9Y426 696 aa5.91□□□□□ -1.46
SMC5-203ENST00000475540 MITFO75030 526 aaPredicted RBP5.9□□□□□ -1.46
SMC5-203ENST00000475540 RSL1D1O76021 490 aaKnown RBP5.9□□□□□ -1.46
SMC5-203ENST00000475540 GCNT3O95395 438 aa5.9□□□□□ -1.46
SMC5-203ENST00000475540 APOHP02749 345 aaPredicted RBP5.9□□□□□ -1.46
SMC5-203ENST00000475540 H1F0P07305 194 aaKnown RBP5.9□□□□□ -1.46
SMC5-203ENST00000475540 CKMT2P17540 419 aa5.9□□□□□ -1.46
SMC5-203ENST00000475540 PSMB10P40306 273 aa5.9□□□□□ -1.46
SMC5-203ENST00000475540 NAP1L1P55209 391 aaKnown RBP5.9□□□□□ -1.46
SMC5-203ENST00000475540 SNRPEP62304 92 aaKnown RBP5.9□□□□□ -1.46
SMC5-203ENST00000475540 DLG2Q15700 870 aa5.9□□□□□ -1.46
SMC5-203ENST00000475540 ADALQ6DHV7 355 aa5.9□□□□□ -1.46
SMC5-203ENST00000475540 ARHGAP11AQ6P4F7 1023 aa5.9□□□□□ -1.46
SMC5-203ENST00000475540 LRRC59Q96AG4 307 aaKnown RBP5.9□□□□□ -1.46
SMC5-203ENST00000475540 HRH4Q9H3N8 390 aa5.9□□□□□ -1.46
SMC5-203ENST00000475540 TSHBP01222 138 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 PATE4P0C8F1 98 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 IGHV4-38-2P0DP08 117 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 ERVK-10P10266 1014 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 EPHA2P29317 976 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 PSMC4P43686 418 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 HSD17B4P51659 736 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 MFAP4P55083 255 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 MFAP5Q13361 173 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 PPIGQ13427 754 aaKnown RBP eCLIP5.89□□□□□ -1.47
SMC5-203ENST00000475540 IRF3Q14653 427 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 GCNT6Q5T4J0 391 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 ARHGAP17Q68EM7 881 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 SLC22A12Q96S37 553 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 LITAFQ99732 161 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 FSD1Q9BTV5 496 aa5.89□□□□□ -1.47
SMC5-203ENST00000475540 MAK16Q9BXY0 300 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms