RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 HRASLS2Q9NWW9 162 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 FARSAQ9Y285 508 aaKnown RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 MAP4K5Q9Y4K4 846 aa13.68□□□□□ -0.22
CCDC78-209ENST00000474647 PCDHGA9Q9Y5G4 932 aaKnown RBP13.68□□□□□ -0.22
CCDC78-209ENST00000474647 DOCK10Q96BY6 2186 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 OR5K3A6NET4 321 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 POP7O75817 140 aaKnown RBP13.67□□□□□ -0.22
CCDC78-209ENST00000474647 MTHFD1P11586 935 aaKnown RBP13.67□□□□□ -0.22
CCDC78-209ENST00000474647 SPAM1P38567 509 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 TNNT3P45378 269 aaPredicted RBP13.67□□□□□ -0.22
CCDC78-209ENST00000474647 TUBB4BP68371 445 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 ZBED6P86452 979 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 MRPL49Q13405 166 aaKnown RBP13.67□□□□□ -0.22
CCDC78-209ENST00000474647 TUBB2AQ13885 445 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 MESDQ14696 234 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 PDK1Q15118 436 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 KMT5CQ86Y97 462 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 RFX6Q8HWS3 928 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 ENDOVQ8N8Q3 282 aaKnown RBP13.67□□□□□ -0.22
CCDC78-209ENST00000474647 RASGEF1AQ8N9B8 481 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 SRPK1Q96SB4 655 aaKnown RBP13.67□□□□□ -0.22
CCDC78-209ENST00000474647 CD180Q99467 661 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 TUBB2BQ9BVA1 445 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 PACSIN1Q9BY11 444 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 SLC29A3Q9BZD2 475 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 CHST8Q9H2A9 424 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 GLOD4Q9HC38 313 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 SLAMF7Q9NQ25 335 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 SEMA5BQ9P283 1151 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 UVRAGQ9P2Y5 699 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 G3BP2Q9UN86 482 aaKnown RBP13.67□□□□□ -0.22
CCDC78-209ENST00000474647 SNX7Q9UNH6 387 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 ZNF451Q9Y4E5 1061 aa13.67□□□□□ -0.22
CCDC78-209ENST00000474647 CREBBPQ92793 2442 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 A6NL46 340 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 F5H423 210 aaPredicted RBP13.66□□□□□ -0.22
CCDC78-209ENST00000474647 ZNF185O15231 689 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 UGT1A9O60656 530 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 DPM1O60762 260 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 KCNJ13O60928 360 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 TMEM63AO94886 807 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 ZBTB11O95625 1053 aaPredicted RBP13.66□□□□□ -0.22
CCDC78-209ENST00000474647 KRT1P04264 644 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 KLK3P07288 261 aaPredicted RBP13.66□□□□□ -0.22
CCDC78-209ENST00000474647 H2AFZP0C0S5 128 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 UGT1A6P19224 532 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 UGT1A1P22309 533 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 UGT1A4P22310 534 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 AKT1P31749 480 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 HMGCLP35914 325 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 DMPKQ09013 629 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 LAMB3Q13751 1172 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 INPP5JQ15735 1006 aaPredicted RBP13.66□□□□□ -0.22
CCDC78-209ENST00000474647 SLC14A2Q15849 920 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 EIF2S3LQ2VIR3 472 aaKnown RBP13.66□□□□□ -0.22
CCDC78-209ENST00000474647 ODF2Q5BJF6 829 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 LDLRAP1Q5SW96 308 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 TMTC4Q5T4D3 741 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 PRAMEF17Q5VTA0 474 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 FAM69BQ5VUD6 431 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 SLC9A4Q6AI14 798 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 JMJD6Q6NYC1 403 aaPredicted RBP13.66□□□□□ -0.22
CCDC78-209ENST00000474647 FBXO38Q6PIJ6 1188 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 TMEM220Q6QAJ8 160 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 H2AFVQ71UI9 128 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 DET1Q7L5Y6 550 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 GLT6D1Q7Z4J2 308 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 D2HGDHQ8N465 521 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 SLC25A41Q8N5S1 370 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 BEND7Q8N7W2 519 aaPredicted RBP13.66□□□□□ -0.22
CCDC78-209ENST00000474647 PRR7Q8TB68 274 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 TADA1Q96BN2 335 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 ZNF501Q96CX3 271 aaPredicted RBP13.66□□□□□ -0.22
CCDC78-209ENST00000474647 CLIP3Q96DZ5 547 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 C12orf66Q96MD2 445 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 TLR10Q9BXR5 811 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 WWP1Q9H0M0 922 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 UGT1A7Q9HAW7 530 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 UGT1A10Q9HAW8 530 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 UGT1A8Q9HAW9 530 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 FANCEQ9HB96 536 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 KCND1Q9NSA2 647 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 CUEDC1Q9NWM3 386 aaPredicted RBP13.66□□□□□ -0.22
CCDC78-209ENST00000474647 LCMT1Q9UIC8 334 aa13.66□□□□□ -0.22
CCDC78-209ENST00000474647 GLYATL1P3A0A0U1RQE8 302 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 OR6C74A6NCV1 312 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 TCP11X1B4DZS4 312 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 BUD23O43709 281 aaKnown RBP13.65□□□□□ -0.22
CCDC78-209ENST00000474647 TNNT1P13805 278 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 GSDMDP57764 484 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 FANCCQ00597 558 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 RAPSNQ13702 412 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 FNBP1LQ5T0N5 605 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 IZUMO3Q5VZ72 239 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 SLC38A9Q8NBW4 561 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 DDHD1Q8NEL9 900 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 FDCSPQ8NFU4 85 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 BLOC1S5Q8TDH9 187 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 CPT1BQ92523 772 aa13.65□□□□□ -0.22
CCDC78-209ENST00000474647 PPM1MQ96MI6 270 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms