RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CCR10P46092 362 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 NFE2L1Q14494 772 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 PTPRCAPQ14761 206 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 PLCL1Q15111 1095 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 CRTC2Q53ET0 693 aaPredicted RBP19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 FAM83HQ6ZRV2 1179 aaPredicted RBP19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 FAM92BQ6ZTR7 304 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 KIAA1328Q86T90 577 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 UBL4BQ8N7F7 174 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 LRRC57Q8N9N7 239 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 TTC13Q8NBP0 860 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 CCDC110Q8TBZ0 833 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 HEXDCQ8WVB3 486 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 UBXN4Q92575 508 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 ULK4Q96C45 1275 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 DCUN1D1Q96GG9 259 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 APOL2Q9BQE5 337 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 LACRTQ9GZZ8 138 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 SLC25A18Q9H1K4 315 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 TUBD1Q9UJT1 453 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 PSMD13Q9UNM6 376 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 REXO2Q9Y3B8 237 aaKnown RBP19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 BSNQ9UPA5 3926 aa19.93■□□□□ 0.78
PDLIM4-206ENST00000474421 MTHFD1P11586 935 aaKnown RBP19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 FGF5P12034 268 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 NELFEP18615 380 aaKnown RBP19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 PBLDP30039 288 aaPredicted RBP19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 CA5AP35218 305 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 BCL7AQ4VC05 210 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 C6orf15Q6UXA7 325 aaPredicted RBP19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 RAD9BQ6WBX8 426 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 DET1Q7L5Y6 550 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 RASGRP3Q8IV61 690 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 SYCE1Q8N0S2 351 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 GPR150Q8NGU9 434 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 OR2L2Q8NH16 312 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 ALG3Q92685 438 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 LINC00615Q96LM1 132 aaPredicted RBP19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 CD180Q99467 661 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 TBL1YQ9BQ87 522 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 IMP3Q9NV31 184 aaKnown RBP19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 SEMA5BQ9P283 1151 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 FKBPLQ9UIM3 349 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 CRLS1Q9UJA2 301 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 AMFRQ9UKV5 643 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 RPS6KL1Q9Y6S9 549 aa19.92■□□□□ 0.78
PDLIM4-206ENST00000474421 GRID2IPA4D2P6 1211 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 MIF4GDA9UHW6 222 aaKnown RBP19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 CFAP99D6REC4 459 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 KIF1CO43896 1103 aaKnown RBP19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 ITGALP20701 1170 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 POLE2P56282 527 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 SH3BP2P78314 561 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 CDC20Q12834 499 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 KCNAB2Q13303 367 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 PEX26Q7Z412 305 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 BPHLQ86WA6 291 aaPredicted RBP19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 PPP1R3BQ86XI6 285 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 KMT5CQ86Y97 462 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 UNC5BQ8IZJ1 945 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 STARD8Q92502 1023 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 STAMBPL1Q96FJ0 436 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 BAG1Q99933 345 aaPredicted RBP19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 RBSNQ9H1K0 784 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 ARNT2Q9HBZ2 717 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 PDE7BQ9NP56 450 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 TENM4Q6N022 2769 aa19.91■□□□□ 0.78
PDLIM4-206ENST00000474421 AGAP14A8MT82 685 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 NKX2-8O15522 239 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 MT-ND3P03897 115 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 SLC35G4P0C7Q5 338 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 CCNYL3P0C7X3 344 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 TCN2P20062 427 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 ZNF140P52738 457 aaPredicted RBP19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 XIAPP98170 497 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 ATG14Q6ZNE5 492 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 ARHGEF18Q6ZSZ5 1173 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 SNX20Q7Z614 316 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 KLHDC8BQ8IXV7 354 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 ACRBPQ8NEB7 543 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 SLC41A2Q96JW4 573 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 C12orf66Q96MD2 445 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 FCRL4Q96PJ5 515 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 FAM118BQ9BPY3 351 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 CCM2Q9BSQ5 444 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 WWP1Q9H0M0 922 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 IL17BQ9UHF5 180 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 KCTD3Q9Y597 815 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 PCDHB3Q9Y5E6 796 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 HEBP2Q9Y5Z4 205 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 COLEC10Q9Y6Z7 277 aa19.9■□□□□ 0.78
PDLIM4-206ENST00000474421 FLNBO75369 2602 aaKnown RBP19.89■□□□□ 0.78
PDLIM4-206ENST00000474421 OR5K3A6NET4 321 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 GOLGA6L3A6NEY3 463 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 SPAG6O75602 509 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 KIAA0754O94854 1291 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 ZIC2O95409 532 aaPredicted RBP19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 PRKAR1AP10644 381 aa19.89■□□□□ 0.77
PDLIM4-206ENST00000474421 NDUFS1P28331 727 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms