RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 FNBP1LQ5T0N5 605 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 CACHD1Q5VU97 1274 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 DENND5AQ6IQ26 1287 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 DARS2Q6PI48 645 aaKnown RBP14.97□□□□□ -0.01
VTI1A-203ENST00000472892 BEND7Q8N7W2 519 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-203ENST00000472892 ALG3Q92685 438 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 SPATA13Q96N96 652 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 OR6C1Q96RD1 312 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 INSM2Q96T92 566 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-203ENST00000472892 C19orf43Q9BQ61 176 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 APOL2Q9BQE5 337 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 RBSNQ9H1K0 784 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 SLC25A18Q9H1K4 315 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 ASB8Q9H765 288 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 ARNT2Q9HBZ2 717 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 ACSL5Q9ULC5 683 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 PSMD13Q9UNM6 376 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 HEMK1Q9Y5R4 338 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-203ENST00000472892 TENM4Q6N022 2769 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 BSNQ9UPA5 3926 aa14.97□□□□□ -0.01
VTI1A-203ENST00000472892 GRID2IPA4D2P6 1211 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 GOLGA6L3A6NEY3 463 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 SUV39H1O43463 412 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 STK10O94804 968 aaKnown RBP14.96□□□□□ -0.01
VTI1A-203ENST00000472892 CRTAMO95727 393 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 CETN2P41208 172 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 CCR10P46092 362 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 POLE2P56282 527 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 PDE1BQ01064 536 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 IRGCQ6NXR0 463 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 AADACL2Q6P093 401 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 KLHL35Q6PF15 583 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 C6orf15Q6UXA7 325 aaPredicted RBP14.96□□□□□ -0.01
VTI1A-203ENST00000472892 FAM92BQ6ZTR7 304 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 KLHDC8BQ8IXV7 354 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 GPR150Q8NGU9 434 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 OR2L2Q8NH16 312 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 CCDC110Q8TBZ0 833 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 ZFPM2Q8WW38 1151 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 SLC41A2Q96JW4 573 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 LINC00615Q96LM1 132 aaPredicted RBP14.96□□□□□ -0.01
VTI1A-203ENST00000472892 PPP1R2P1Q96PQ5 205 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 FAM118BQ9BPY3 351 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 ULBP3Q9BZM4 244 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 FKBPLQ9UIM3 349 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 TUBD1Q9UJT1 453 aa14.96□□□□□ -0.01
VTI1A-203ENST00000472892 MACROD2A1Z1Q3 448 aa14.95□□□□□ -0.02
VTI1A-203ENST00000472892 SGTAO43765 313 aa14.95□□□□□ -0.02
VTI1A-203ENST00000472892 ZNF189O75820 626 aaPredicted RBP14.95□□□□□ -0.02
VTI1A-203ENST00000472892 MTHFD1P11586 935 aaKnown RBP14.95□□□□□ -0.02
VTI1A-203ENST00000472892 AKT1P31749 480 aa14.95□□□□□ -0.02
VTI1A-203ENST00000472892 VAV2P52735 878 aa14.95□□□□□ -0.02
VTI1A-203ENST00000472892 PPP1CAP62136 330 aa14.95□□□□□ -0.02
VTI1A-203ENST00000472892 MC1RQ01726 317 aa14.95□□□□□ -0.02
VTI1A-203ENST00000472892 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.95□□□□□ -0.02
VTI1A-203ENST00000472892 BCL7AQ4VC05 210 aa14.95□□□□□ -0.02
VTI1A-203ENST00000472892 DET1Q7L5Y6 550 aa14.95□□□□□ -0.02
VTI1A-203ENST00000472892 PRICKLE2Q7Z3G6 844 aa14.95□□□□□ -0.02
VTI1A-203ENST00000472892 ACRBPQ8NEB7 543 aa14.95□□□□□ -0.02
VTI1A-203ENST00000472892 UBXN4Q92575 508 aa14.95□□□□□ -0.02
VTI1A-203ENST00000472892 FEZ2Q9UHY8 353 aaPredicted RBP14.95□□□□□ -0.02
VTI1A-203ENST00000472892 RPS6KL1Q9Y6S9 549 aa14.95□□□□□ -0.02
VTI1A-203ENST00000472892 IGHV5-51A0A0C4DH38 117 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 TERTO14746 1132 aaKnown RBP14.94□□□□□ -0.02
VTI1A-203ENST00000472892 LDB2O43679 373 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 SPAG6O75602 509 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 WISP1O95388 367 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 F8A1P23610 371 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 OAS2P29728 719 aaKnown RBP14.94□□□□□ -0.02
VTI1A-203ENST00000472892 PBLDP30039 288 aaPredicted RBP14.94□□□□□ -0.02
VTI1A-203ENST00000472892 ZNF140P52738 457 aaPredicted RBP14.94□□□□□ -0.02
VTI1A-203ENST00000472892 NFKB2Q00653 900 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 KCNC4Q03721 635 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 CDC20Q12834 499 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 KCNAB2Q13303 367 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 SPARCL1Q14515 664 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 KCTD11Q693B1 232 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 CAPRIN2Q6IMN6 1127 aaKnown RBP14.94□□□□□ -0.02
VTI1A-203ENST00000472892 CYB5D1Q6P9G0 228 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 ATG14Q6ZNE5 492 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 BPHLQ86WA6 291 aaPredicted RBP14.94□□□□□ -0.02
VTI1A-203ENST00000472892 PPP1R3BQ86XI6 285 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 RASGRP3Q8IV61 690 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 GALNT6Q8NCL4 622 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 OR13C4Q8NGS5 318 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 STARD8Q92502 1023 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 ULK4Q96C45 1275 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 ELMO2Q96JJ3 720 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 FCRL4Q96PJ5 515 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 TBL1YQ9BQ87 522 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 WWP1Q9H0M0 922 aa14.94□□□□□ -0.02
VTI1A-203ENST00000472892 IMP3Q9NV31 184 aaKnown RBP14.94□□□□□ -0.02
VTI1A-203ENST00000472892 CFAP20Q9Y6A4 193 aaKnown RBP14.94□□□□□ -0.02
VTI1A-203ENST00000472892 TLN1Q9Y490 2541 aaKnown RBP14.94□□□□□ -0.02
VTI1A-203ENST00000472892 C17orf113A0A1B0GUU1 675 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 OR5K3A6NET4 321 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 PYCARD-AS1I3L0S3 204 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 KIAA0754O94854 1291 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 PRKAR1AP10644 381 aa14.93□□□□□ -0.02
VTI1A-203ENST00000472892 RALBP11234 206 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms