RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 C9orf172C9J069 976 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 HGSO14964 777 aaPredicted RBP19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 NVLO15381 856 aaKnown RBP19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 KRT14P02533 472 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 FGF3P11487 239 aaPredicted RBP19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 XRCC1P18887 633 aaPredicted RBP19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 CSTF2P33240 577 aaKnown RBP eCLIP19.5■□□□□ 0.714e-9■■■■■ 30.8
UBQLN4-203ENST00000472638 TMPRSS3P57727 454 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 XIAPP98170 497 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 TRA2AQ13595 282 aaKnown RBP eCLIP19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 ARHGAP40Q5TG30 622 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 ABRAXAS1Q6UWZ7 409 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 FAM83HQ6ZRV2 1179 aaPredicted RBP19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 GPR155Q7Z3F1 870 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 PRUNE1Q86TP1 453 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 ZFAND4Q86XD8 727 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 GLIS1Q8NBF1 620 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 AVL9Q8NBF6 648 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 AGBL5Q8NDL9 886 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 CXorf40BQ96DE9 158 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 TRIM51Q9BSJ1 452 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 FAM8A1Q9UBU6 413 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 CRLS1Q9UJA2 301 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 PSMD13Q9UNM6 376 aa19.5■□□□□ 0.71
UBQLN4-203ENST00000472638 CCDC78A2IDD5 438 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 LDB2O43679 373 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 TYRP1P17643 537 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 EPHA4P54764 986 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 PDE1BQ01064 536 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 NFE2L1Q14494 772 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 POU6F1Q14863 301 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 CLCA4Q14CN2 919 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 SOWAHCQ53LP3 525 aaPredicted RBP19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 TMEM26Q6ZUK4 368 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 FAM129CQ86XR2 697 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 PMEPA1Q969W9 287 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 DNAJC1Q96KC8 554 aaKnown RBP19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 BBC3Q96PG8 261 aaPredicted RBP19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 ERP44Q9BS26 406 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 OCIAD1Q9NX40 245 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 ASIC3Q9UHC3 531 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 UTP11Q9Y3A2 253 aaKnown RBP19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 SLC30A1Q9Y6M5 507 aa19.49■□□□□ 0.71
UBQLN4-203ENST00000472638 LILRA5A6NI73 299 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 EFCAB7A8K855 629 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 BHMG1C9JSJ3 638 aaPredicted RBP19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 PSMD3O43242 534 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 AP2A1O95782 977 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 ETS1P14921 441 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 RPL22P35268 128 aaKnown RBP19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 HALP42357 657 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 UCNP55089 124 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 AGAP9Q5VTM2 703 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 WDR74Q6RFH5 385 aaPredicted RBP19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 WASH2PQ6VEQ5 465 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 SEC14L1Q92503 715 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 ART4Q93070 314 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 ETNK1Q9HBU6 452 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 WASH6PQ9NQA3 447 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 OGFRQ9NZT2 677 aa19.48■□□□□ 0.71
UBQLN4-203ENST00000472638 NDC80O14777 642 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 UBXN7O94888 489 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 ZSCAN5DPP0CG00 497 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 PRSS56P0CW18 603 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 AMD1P17707 334 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 ITGALP20701 1170 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 MC4RP32245 332 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 FDFT1P37268 417 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 HADHAP40939 763 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 CDKN1CP49918 316 aaPredicted RBP19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 GFERP55789 205 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 MRPS25P82663 173 aaKnown RBP19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 SRSF6Q13247 344 aaKnown RBP19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 ZRANB3Q5FWF4 1079 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 TMEM164Q5U3C3 297 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 OR52K1Q8NGK4 314 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 JPH3Q8WXH2 748 aaPredicted RBP19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 UBXN4Q92575 508 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 DCUN1D1Q96GG9 259 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 TAAR9Q96RI9 348 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 POT1Q9NUX5 634 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 SLC39A1Q9NY26 324 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 PDP2Q9P2J9 529 aa19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 DNMT3AQ9Y6K1 912 aaPredicted RBP19.47■□□□□ 0.71
UBQLN4-203ENST00000472638 BPTFQ12830 3046 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 KCNJ13O60928 360 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 LIPCP11150 499 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 LMAN1P49257 510 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 VAC14Q08AM6 782 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 DMPKQ09013 629 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 GPS1Q13098 491 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 GPR18Q14330 331 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 TRIP13Q15645 432 aaPredicted RBP19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 CCDC38Q502W7 563 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 DUPD1Q68J44 220 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 TAS2R42Q7RTR8 314 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 ARHGAP22Q7Z5H3 698 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 SNX20Q7Z614 316 aa19.46■□□□□ 0.71
UBQLN4-203ENST00000472638 NXPE1Q8N323 547 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms