RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	TULP2	O00295	520 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	ACOT8	O14734	319 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	EIF3D	O15371	548 aa	Known RBP eCLIP	3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	SSX4	O60224	188 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	TBX10	O75333	385 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	ZWINT	O95229	277 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	BCL10	O95999	233 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	FGF3	P11487	239 aa	Predicted RBP	3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	CDH1	P12830	882 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	EEF1D	P29692	281 aa	Known RBP	3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	AHR	P35869	848 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	CCR3	P51677	355 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	PPP5C	P53041	499 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	KRTAP10-11	P60412	298 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	UBXN2A	P68543	259 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	CDK3	Q00526	305 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	IL11RA	Q14626	422 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	SNAPC1	Q16533	368 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	CCDC96	Q2M329	555 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	TEX38	Q6PEX7	206 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	PLPPR4	Q7Z2D5	763 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	RBM15B	Q8NDT2	890 aa	Known RBP	3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	WDR20	Q8TBZ3	569 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	SMPDL3B	Q92485	455 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	IGSF21	Q96ID5	467 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	IL17F	Q96PD4	163 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	OR6C1	Q96RD1	312 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	GPR88	Q9GZN0	384 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	OR10A4	Q9H209	315 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	HHATL	Q9HCP6	504 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	OLAH	Q9NV23	265 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	CFDP1	Q9UEE9	299 aa	Predicted RBP	3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	DDX25	Q9UHL0	483 aa	Known RBP	3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	POU2F3	Q9UKI9	436 aa		3.68	□□□□□ -1.82
PTCD3-209	ENST00000472044	IGKV2D-30	A0A075B6S6	120 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044		A0A1B0GUV1	79 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	TRBC2	A0A5B9	178 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	HEPACAM2	A8MVW5	462 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	TMEM178B	H3BS89	294 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	TCERG1	O14776	1098 aa	Known RBP	3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	SNRNP70	P08621	437 aa	Known RBP	3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	AMPH	P49418	695 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	FUT6	P51993	359 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	MLLT10	P55197	1068 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	CD81	P60033	236 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	GAGE5	Q13069	117 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	GAGE6	Q13070	117 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	GCNT6	Q5T4J0	391 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	OR7E24	Q6IFN5	339 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	KRT80	Q6KB66	452 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	FAM198B	Q6UWH4	519 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	CAMKMT	Q7Z624	323 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	NAGS	Q8N159	534 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	GBGT1	Q8N5D6	347 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	TC2N	Q8N9U0	490 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	RDM1	Q8NG50	284 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	MOSPD2	Q8NHP6	518 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	EXD1	Q8NHP7	514 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	CFAP61	Q8NHU2	1237 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	BBS10	Q8TAM1	723 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	LMO3	Q8TAP4	145 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	SPACA9	Q96E40	222 aa	Predicted RBP	3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	ABHD8	Q96I13	439 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	CFAP57	Q96MR6	1250 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	ZNF830	Q96NB3	372 aa	Predicted RBP	3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	MS4A10	Q96PG2	267 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	C16orf70	Q9BSU1	422 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	SEMA6A	Q9H2E6	1030 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	SLA2	Q9H6Q3	261 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	ANKZF1	Q9H8Y5	726 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	PIH1D3	Q9NQM4	214 aa	Known RBP	3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	HAO2	Q9NYQ3	351 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	GIMAP2	Q9UG22	337 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	OSGIN1	Q9UJX0	560 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	RALY	Q9UKM9	306 aa	Known RBP	3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044	CCL27	Q9Y4X3	112 aa		3.67	□□□□□ -1.82
PTCD3-209	ENST00000472044		A0A0G2JNG1	304 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	PLSCR5	A0PG75	271 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044		H7C0S8	307 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	IPO8	O15397	1037 aa	Known RBP	3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	GPR137B	O60478	399 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	MED24	O75448	989 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	PSMD10	O75832	226 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	PDE9A	O76083	593 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	TOMM70	O94826	608 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	BMP10	O95393	424 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	GCNT3	O95395	438 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	LINGO3	P0C6S8	592 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	DANCR	P0C864	163 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	MYBL1	P10243	752 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	PFKFB1	P16118	471 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	IL15	P40933	162 aa	Predicted RBP	3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	RAD23A	P54725	363 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	CDH13	P55290	713 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	PITX1	P78337	314 aa	Predicted RBP	3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	EEF1A2	Q05639	463 aa	Known RBP	3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	TROAP	Q12815	778 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	COASY	Q13057	564 aa		3.66	□□□□□ -1.82
PTCD3-209	ENST00000472044	KIR2DS5	Q14953	304 aa		3.66	□□□□□ -1.82

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