RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 RHOAP61586 193 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 RBBP7Q16576 425 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 SHISA6Q6ZSJ9 500 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 STXBP4Q6ZWJ1 553 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 DPPA4Q7L190 304 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 PHYKPLQ8IUZ5 450 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 DRC7Q8IY82 874 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 ZNF683Q8IZ20 524 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 MEIOBQ8N635 442 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 PAF1Q8N7H5 531 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 SLC35F5Q8WV83 523 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 PPM1MQ96MI6 270 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 CD180Q99467 661 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 MESP1Q9BRJ9 268 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 SLC40A1Q9NP59 571 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.34□□□□□ -1.39
HDAC3-206ENST00000471968 POT1Q9NUX5 634 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 Q9UFV3 132 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 SERTAD3Q9UJW9 196 aa6.34□□□□□ -1.39
HDAC3-206ENST00000471968 EPN1Q9Y6I3 576 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-206ENST00000471968 OR52A4PA6NMU1 304 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 MAPK13O15264 365 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 TMPRSS2O15393 492 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 TCF21O43680 179 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 VEGFDO43915 354 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 SRGAP2O75044 1071 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 HPP00738 406 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 PRR35P0CG20 571 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 ZNF24P17028 368 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 ITGA2P17301 1181 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 EEF1DP29692 281 aaKnown RBP6.33□□□□□ -1.4
HDAC3-206ENST00000471968 KRT9P35527 623 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 PREPP48147 710 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 NME3Q13232 169 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 LRRC31Q6UY01 552 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 IL17RELQ6ZVW7 336 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 BEND5Q7L4P6 421 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 CAMK1DQ8IU85 385 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 ARIH2OSQ8N7S6 290 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 SLC22A8Q8TCC7 542 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 TAS1R2Q8TE23 839 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 DTD2Q96FN9 168 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 VPS50Q96JG6 964 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 ZNF396Q96N95 335 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-206ENST00000471968 TRIM62Q9BVG3 475 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 AP1M1Q9BXS5 423 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 KLHL25Q9H0H3 589 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 UBTD1Q9HAC8 227 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 POPDC2Q9HBU9 364 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 PDRG1Q9NUG6 133 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 PANK4Q9NVE7 773 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 DHCR7Q9UBM7 475 aaKnown RBP6.33□□□□□ -1.4
HDAC3-206ENST00000471968 ZNF212Q9UDV6 495 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 ALG6Q9Y672 507 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 CR1P17927 2039 aa6.33□□□□□ -1.4
HDAC3-206ENST00000471968 PDZK1P1A8MUH7 402 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 M0QYV0 167 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 SART1O43290 800 aaKnown RBP6.32□□□□□ -1.4
HDAC3-206ENST00000471968 BUB1O43683 1085 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 CDC40O60508 579 aaKnown RBP eCLIP6.32□□□□□ -1.4
HDAC3-206ENST00000471968 WFS1O76024 890 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 GOSR1O95249 250 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 SOD1P00441 154 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 ATP1A1P05023 1023 aaKnown RBP6.32□□□□□ -1.4
HDAC3-206ENST00000471968 CELA2AP08217 269 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 TMIGD3P0DMS9 266 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-206ENST00000471968 FPR1P21462 350 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 TEAD1P28347 426 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 COMPP49747 757 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-206ENST00000471968 YWHAZP63104 245 aaKnown RBP6.32□□□□□ -1.4
HDAC3-206ENST00000471968 ACTG1P63261 375 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 CDK17Q00537 523 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 TAP2Q03519 686 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 ZNF33BQ06732 778 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 MTA1Q13330 715 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 CNGA3Q16281 694 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 CLEC12BQ2HXU8 276 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 NKAIN1Q4KMZ8 207 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 TFDP3Q5H9I0 405 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 EMC4Q5J8M3 183 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 RNFT1Q5M7Z0 435 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 ABHD17BQ5VST6 288 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 KLHL35Q6PF15 583 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 TRIM72Q6ZMU5 477 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 NEK10Q6ZWH5 1172 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 STRADAQ7RTN6 431 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 HSD11B1LQ7Z5J1 315 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-206ENST00000471968 PHLDB2Q86SQ0 1253 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 SLC13A5Q86YT5 568 aaPredicted RBP6.32□□□□□ -1.4
HDAC3-206ENST00000471968 NELFCDQ8IXH7 590 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 TTC39CQ8N584 583 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 CCDC150Q8NCX0 1101 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 SLCO2A1Q92959 643 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 CXorf40BQ96DE9 158 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 EEF2KMTQ96G04 330 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 C8orf76Q96K31 380 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 HSFY1Q96LI6 401 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 AK8Q96MA6 479 aa6.32□□□□□ -1.4
HDAC3-206ENST00000471968 ZNF641Q96N77 438 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms