RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 FOXK2Q01167 660 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 FRG1Q14331 258 aaKnown RBP14.83□□□□□ -0.04
SNX13-205ENST00000471744 NFE2L1Q14494 772 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 NR1D2Q14995 579 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 DNTTIP2Q5QJE6 756 aaKnown RBP14.83□□□□□ -0.04
SNX13-205ENST00000471744 ZNF470Q6ECI4 717 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 CEP128Q6ZU80 1094 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 ZNF438Q7Z4V0 828 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 RAB44Q7Z6P3 723 aaPredicted RBP14.83□□□□□ -0.04
SNX13-205ENST00000471744 KCNMB4Q86W47 210 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 TMPRSS12Q86WS5 348 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 RBM12BQ8IXT5 1001 aaKnown RBP14.83□□□□□ -0.04
SNX13-205ENST00000471744 CACTIN-AS1Q8N1I8 211 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 CLDN19Q8N6F1 224 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 PNPLA1Q8N8W4 532 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 SLC37A2Q8TED4 501 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 CCDC74AQ96AQ1 378 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 CCDC97Q96F63 343 aaPredicted RBP14.83□□□□□ -0.04
SNX13-205ENST00000471744 PANX3Q96QZ0 392 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 CARD6Q9BX69 1037 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.83□□□□□ -0.04
SNX13-205ENST00000471744 PRDM8Q9NQV8 689 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 CHMP2BQ9UQN3 213 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 PCDHB1Q9Y5F3 818 aa14.83□□□□□ -0.04
SNX13-205ENST00000471744 DCHS1Q96JQ0 3298 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 KPNA5O15131 536 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 OPA1O60313 960 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 OR1I1O60431 355 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 BANF1O75531 89 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 TCEA3O75764 348 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 ESR1P03372 595 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 SLC35G4P0C7Q5 338 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 RPL10P27635 214 aaKnown RBP14.82□□□□□ -0.04
SNX13-205ENST00000471744 SLC7A5Q01650 507 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 HHEXQ03014 270 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 SMAD1Q15797 465 aaKnown RBP14.82□□□□□ -0.04
SNX13-205ENST00000471744 CLPPQ16740 277 aaPredicted RBP14.82□□□□□ -0.04
SNX13-205ENST00000471744 PERM1Q5SV97 790 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.82□□□□□ -0.04
SNX13-205ENST00000471744 STEAP4Q687X5 459 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 PTRHD1Q6GMV3 140 aaKnown RBP14.82□□□□□ -0.04
SNX13-205ENST00000471744 DHRS13Q6UX07 377 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 MICALCLQ6ZW33 695 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 TRIM48Q8IWZ4 208 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 CFAP206Q8IYR0 622 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 NOA1Q8NC60 698 aaKnown RBP14.82□□□□□ -0.04
SNX13-205ENST00000471744 PATE1Q8WXA2 126 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 CXorf40BQ96DE9 158 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 CCDC3Q9BQI4 270 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 TRIM56Q9BRZ2 755 aaKnown RBP14.82□□□□□ -0.04
SNX13-205ENST00000471744 TSPYL1Q9H0U9 437 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 COG4Q9H9E3 785 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 L2HGDHQ9H9P8 463 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 UCK1Q9HA47 277 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 POT1Q9NUX5 634 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 CPNE7Q9UBL6 633 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 HEBP2Q9Y5Z4 205 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 PRSS21Q9Y6M0 314 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 RNF215Q9Y6U7 377 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 NCOR2Q9Y618 2525 aa14.82□□□□□ -0.04
SNX13-205ENST00000471744 UBA6A0AVT1 1052 aaPredicted RBP14.81□□□□□ -0.04
SNX13-205ENST00000471744 ESPNB1AK53 854 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 GOLGA8KD6RF30 607 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 GOLGA8TH3BQL2 631 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 EML2O95834 649 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 VIPP01282 170 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 UBE2IP63279 158 aaKnown RBP14.81□□□□□ -0.04
SNX13-205ENST00000471744 GUCY2DQ02846 1103 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 FOXC1Q12948 553 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 TMED2Q15363 201 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 SEPT7Q16181 437 aaKnown RBP14.81□□□□□ -0.04
SNX13-205ENST00000471744 UNC5AQ6ZN44 842 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 FAM83HQ6ZRV2 1179 aaPredicted RBP14.81□□□□□ -0.04
SNX13-205ENST00000471744 KIAA0408Q6ZU52 694 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 TMPRSS7Q7RTY8 843 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 LDB1Q86U70 411 aaPredicted RBP14.81□□□□□ -0.04
SNX13-205ENST00000471744 IGDCC3Q8IVU1 814 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 SFTPA2Q8IWL1 248 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 ZBED8Q8IZ13 594 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 FBXO36Q8NEA4 188 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 FBXO25Q8TCJ0 367 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 PYROXD1Q8WU10 500 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 ELMO1Q92556 727 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 LPGAT1Q92604 370 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 CERS2Q96G23 380 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 CFAP36Q96G28 342 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 PWWP2AQ96N64 755 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 P2RY12Q9H244 342 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 CCDC68Q9H2F9 335 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 EPB41L1Q9H4G0 881 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 EPB41L5Q9HCM4 733 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 MTRF1LQ9UGC7 380 aaKnown RBP14.81□□□□□ -0.04
SNX13-205ENST00000471744 FBXO5Q9UKT4 447 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 COMMD10Q9Y6G5 202 aa14.81□□□□□ -0.04
SNX13-205ENST00000471744 LILRA5A6NI73 299 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 BHMG1C9JSJ3 638 aaPredicted RBP14.8□□□□□ -0.04
SNX13-205ENST00000471744 IFRD1O00458 451 aaPredicted RBP14.8□□□□□ -0.04
SNX13-205ENST00000471744 PPM1DO15297 605 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 S1PR4O95977 384 aa14.8□□□□□ -0.04
SNX13-205ENST00000471744 GSTA2P09210 222 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms