RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 GLMNQ92990 594 aa9.23□□□□□ -0.93
VPS52-216ENST00000471309 ERP27Q96DN0 273 aa9.23□□□□□ -0.93
VPS52-216ENST00000471309 ZNF514Q96K75 400 aaPredicted RBP9.23□□□□□ -0.93
VPS52-216ENST00000471309 GUCD1Q96NT3 240 aa9.23□□□□□ -0.93
VPS52-216ENST00000471309 VTI1BQ9UEU0 232 aa9.23□□□□□ -0.93
VPS52-216ENST00000471309 ADAMTS6Q9UKP5 1117 aa9.23□□□□□ -0.93
VPS52-216ENST00000471309 MMP17Q9ULZ9 603 aa9.23□□□□□ -0.93
VPS52-216ENST00000471309 SLC12A4Q9UP95 1085 aa9.23□□□□□ -0.93
VPS52-216ENST00000471309 OR2AG2A6NM03 316 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 LOC730098B7Z3J9 87 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 K7ESM1 405 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 MAN2B1O00754 1011 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 INPP4BO15327 924 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 SLC16A5O15375 505 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 HDAC3O15379 428 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 FFAR2O15552 330 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 VEGFDO43915 354 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 GPC4O75487 556 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 SUPT7LO94864 414 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 UBOX5O94941 541 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 PCDH8O95206 1070 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 SIX3O95343 332 aaPredicted RBP9.22□□□□□ -0.93
VPS52-216ENST00000471309 C8GP07360 202 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 VCLP18206 1134 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 SERPINB3P29508 390 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 EEF1DP29692 281 aaKnown RBP9.22□□□□□ -0.93
VPS52-216ENST00000471309 MAPK9P45984 424 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 IDH3AP50213 366 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 CTSCP53634 463 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 ADPRHP54922 357 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 RPS21P63220 83 aaKnown RBP9.22□□□□□ -0.93
VPS52-216ENST00000471309 LCP2Q13094 533 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 TUBB3Q13509 450 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 GTF2H3Q13889 308 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 BOP1Q14137 746 aaKnown RBP9.22□□□□□ -0.93
VPS52-216ENST00000471309 PCBP2Q15366 365 aaKnown RBP eCLIP9.22□□□□□ -0.93
VPS52-216ENST00000471309 MLF2Q15773 248 aaPredicted RBP9.22□□□□□ -0.93
VPS52-216ENST00000471309 MAP7D1Q3KQU3 841 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 SYTL3Q4VX76 610 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 TMEM259Q4ZIN3 620 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 SLC44A4Q53GD3 710 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 CDKL4Q5MAI5 379 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 ZNF648Q5T619 568 aaPredicted RBP9.22□□□□□ -0.93
VPS52-216ENST00000471309 SEL1L3Q68CR1 1132 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 ANKS6Q68DC2 871 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 METTL2BQ6P1Q9 378 aaKnown RBP9.22□□□□□ -0.93
VPS52-216ENST00000471309 PNCKQ6P2M8 343 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 EPGNQ6UW88 154 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 CYHR1Q6ZMK1 362 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 Q7L0L9 218 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 CLNKQ7Z7G1 428 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 ADGRG6Q86SQ4 1221 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 RPLP0P6Q8NHW5 317 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 AGR3Q8TD06 166 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 ZNF483Q8TF39 744 aaPredicted RBP9.22□□□□□ -0.93
VPS52-216ENST00000471309 UBTD2Q8WUN7 234 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 ASZ1Q8WWH4 475 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 ELMO1Q92556 727 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 MOCOSQ96EN8 888 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 COX14Q96I36 57 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 HIC2Q96JB3 615 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 FAR2Q96K12 515 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 LINC00615Q96LM1 132 aaPredicted RBP9.22□□□□□ -0.93
VPS52-216ENST00000471309 EBF4Q9BQW3 602 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 C1QTNF2Q9BXJ5 285 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 MYLK2Q9H1R3 596 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 COG4Q9H9E3 785 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 ACTR5Q9H9F9 607 aaPredicted RBP9.22□□□□□ -0.93
VPS52-216ENST00000471309 RDH14Q9HBH5 336 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 TRIM39Q9HCM9 518 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 PREBQ9HCU5 417 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 ACSS2Q9NR19 701 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 FBXL12Q9NXK8 326 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 CD274Q9NZQ7 290 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 HEY2Q9UBP5 337 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 ZFP69BQ9UJL9 534 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 PCTPQ9UKL6 214 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 DUSP12Q9UNI6 340 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 CDYLQ9Y232 598 aa9.22□□□□□ -0.93
VPS52-216ENST00000471309 APOBEC2Q9Y235 224 aaKnown RBP9.22□□□□□ -0.93
VPS52-216ENST00000471309 TNPO3Q9Y5L0 923 aaKnown RBP9.22□□□□□ -0.93
VPS52-216ENST00000471309 IGLON5A6NGN9 336 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 NCF1BA6NI72 391 aaPredicted RBP9.21□□□□□ -0.94
VPS52-216ENST00000471309 TRPC5OSA6NMA1 111 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 NCF1CA8MVU1 366 aaPredicted RBP9.21□□□□□ -0.94
VPS52-216ENST00000471309 GPR89AB7ZAQ6 455 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 FCHO1O14526 889 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 UBFD1O14562 309 aaKnown RBP9.21□□□□□ -0.94
VPS52-216ENST00000471309 GRID2O43424 1007 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 CCDC22O60826 627 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 LILRB5O75023 590 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 CDK14O94921 469 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 SLCO2B1O94956 709 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 MLYCDO95822 493 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 SERPINA6P08185 405 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 GPR89BP0CG08 455 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 NCF1P14598 390 aaPredicted RBP9.21□□□□□ -0.94
VPS52-216ENST00000471309 CCR3P51677 355 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 CDKL1Q00532 357 aa9.21□□□□□ -0.94
VPS52-216ENST00000471309 HSPA14Q0VDF9 509 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms