RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 AGRNO00468 2067 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 ABCA7Q8IZY2 2146 aa1.3□□□□□ -2.2
UBXN4-207ENST00000471246 PCNX3Q9H6A9 2034 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 A0A0J9YWU9 116 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 MEIOCA2RUB1 952 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 LIPT2A6NK58 231 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 OR6C76A6NM76 312 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 A8MZ25 164 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 J3QR06 171 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF197O14709 1029 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 SCAMP1O15126 338 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 TMCC2O75069 709 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 TRMUO75648 421 aaKnown RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 TMEM63AO94886 807 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 HIST1H2ABP04908 130 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 H1F0P07305 194 aaKnown RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 PLA2G4BP0C869 781 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 FAM157CP0CG43 387 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 HSPA1AP0DMV8 641 aaKnown RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 HSPA1BP0DMV9 641 aaKnown RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 ACTN1P12814 892 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 CDH2P19022 906 aaPredicted RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 HIST1H2ADP20671 130 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 NFKBIAP25963 317 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 KRT9P35527 623 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 WNT5AP41221 380 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 LMO4P61968 165 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 PRKAA1Q13131 559 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 TUBB2AQ13885 445 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 SLC1A5Q15758 541 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 ADAMTSL4-AS1Q5T5F5 129 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 INTS11Q5TA45 600 aaKnown RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 GKAP1Q5VSY0 366 aaPredicted RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 ZDHHC20Q5W0Z9 365 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 PWWP2BQ6NUJ5 590 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 BHLHB9Q6PI77 547 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 TPRG1Q6ZUI0 275 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 DENND5BQ6ZUT9 1274 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 HIST3H2AQ7L7L0 130 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 FASTKD5Q7L8L6 764 aaKnown RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 GTSCR1Q86UQ5 136 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 PLD3Q8IV08 490 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 CEP97Q8IW35 865 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 NGEFQ8N5V2 710 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 L3MBTL4Q8NA19 623 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 NAXEQ8NCW5 288 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 PPHLN1Q8NEY8 458 aaKnown RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 TDRD7Q8NHU6 1098 aaKnown RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 RFFLQ8WZ73 363 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 LINC00479Q96M42 142 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 C7orf26Q96N11 449 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 ZNF582Q96NG8 517 aaPredicted RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 NUDCD1Q96RS6 583 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 GAD1Q99259 594 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 PSMD1Q99460 953 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 DDOQ99489 341 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 TUBB2BQ9BVA1 445 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 CDK19Q9BWU1 502 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 MUC13Q9H3R2 512 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 PLK3Q9H4B4 646 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 DENND2DQ9H6A0 471 aaPredicted RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 SLA2Q9H6Q3 261 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 PELI2Q9HAT8 420 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 OLFML3Q9NRN5 406 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 ECHDC1Q9NTX5 307 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 ATAD3AQ9NVI7 634 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 TRMT1Q9NXH9 659 aaKnown RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 BARHL2Q9NY43 387 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 C9orf78Q9NZ63 289 aaPredicted RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 COQ3Q9NZJ6 369 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 PAK5Q9P286 719 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 KLHL8Q9P2G9 620 aaPredicted RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 TSPYL4Q9UJ04 414 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 RASAL2Q9UJF2 1139 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 MTMR6Q9Y217 621 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 RABGAP1Q9Y3P9 1069 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 RNF215Q9Y6U7 377 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 PIAS3Q9Y6X2 628 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 DISP3Q9P2K9 1392 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 COL2A1P02458 1487 aaPredicted RBP1.29□□□□□ -2.2
UBXN4-207ENST00000471246 ARHGEF40Q8TER5 1519 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
UBXN4-207ENST00000471246 IGHV4-4A0A075B6R2 117 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 IGHV4-61A0A0C4DH41 118 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 SLCO1B7G3V0H7 640 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 DNM1LO00429 736 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 SH2B2O14492 632 aaPredicted RBP1.28□□□□□ -2.2
UBXN4-207ENST00000471246 NPHP1O15259 732 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 HS6ST1O60243 411 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 GPC4O75487 556 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 EML2O95834 649 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 NGFP01138 241 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 GH2P01242 217 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 IGHV4-59P01825 116 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 SRPRAP08240 638 aaKnown RBP1.28□□□□□ -2.2
UBXN4-207ENST00000471246 HMBSP08397 361 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 ACP2P11117 423 aa1.28□□□□□ -2.2
UBXN4-207ENST00000471246 DPEP1P16444 411 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms