RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 NDUFAF2Q8N183 169 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.95□□□□□ -0.98
SF3A1-206ENST00000471037 CPT1BQ92523 772 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 SCAMP4Q969E2 229 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 AHCYL2Q96HN2 611 aaKnown RBP8.95□□□□□ -0.98
SF3A1-206ENST00000471037 SLC38A3Q99624 504 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 ZMYND15Q9H091 742 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 TRIT1Q9H3H1 467 aaKnown RBP8.95□□□□□ -0.98
SF3A1-206ENST00000471037 ETNK1Q9HBU6 452 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 GRHL1Q9NZI5 618 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 VPS18Q9P253 973 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 CD84Q9UIB8 345 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 ANAPC5Q9UJX4 755 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 RAB21Q9UL25 225 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 TMEM98Q9Y2Y6 226 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 AAR2Q9Y312 384 aaKnown RBP8.95□□□□□ -0.98
SF3A1-206ENST00000471037 TTLL3Q9Y4R7 772 aa8.95□□□□□ -0.98
SF3A1-206ENST00000471037 DOPEY2Q9Y3R5 2298 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 COL12A1Q99715 3063 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 LRRK2Q5S007 2527 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 ZFC3H1O60293 1989 aaKnown RBP8.94□□□□□ -0.98
SF3A1-206ENST00000471037 UQCRHLA0A096LP55 91 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 ESYT3A0FGR9 886 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 A6NCN8 305 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 DNAJC6O75061 913 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 AP2A1O95782 977 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 EML2O95834 649 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 APRTP07741 180 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 UQCRHP07919 91 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 PDHA1P08559 390 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 ANKRD34CP0C6C1 535 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 GP1BBP13224 206 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 CTPS1P17812 591 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 OAS2P29728 719 aaKnown RBP8.94□□□□□ -0.98
SF3A1-206ENST00000471037 LMAN1P49257 510 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 CARSP49589 748 aaKnown RBP8.94□□□□□ -0.98
SF3A1-206ENST00000471037 STC1P52823 247 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 ITGA8P53708 1063 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 GEMP55040 296 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 SARNPP82979 210 aaKnown RBP8.94□□□□□ -0.98
SF3A1-206ENST00000471037 HHEXQ03014 270 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 PTSQ03393 145 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 ITKQ08881 620 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 MPP3Q13368 585 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 MAP7Q14244 749 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 KCNJ11Q14654 390 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 PPP1R21Q6ZMI0 780 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 RFLNAQ6ZTI6 216 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 CEP128Q6ZU80 1094 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 MARK2Q7KZI7 788 aaKnown RBP8.94□□□□□ -0.98
SF3A1-206ENST00000471037 TRIM74Q86UV6 250 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 NAT8LQ8N9F0 302 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 APOBEC4Q8WW27 367 aaKnown RBP8.94□□□□□ -0.98
SF3A1-206ENST00000471037 IFT81Q8WYA0 676 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 STARD8Q92502 1023 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 SH3KBP1Q96B97 665 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 IMP4Q96G21 291 aaKnown RBP8.94□□□□□ -0.98
SF3A1-206ENST00000471037 ABHD17AQ96GS6 310 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 AGAP2Q99490 1192 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 PARD6BQ9BYG5 372 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 TSPYL1Q9H0U9 437 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 EPB41L1Q9H4G0 881 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 STN1Q9H668 368 aaKnown RBP8.94□□□□□ -0.98
SF3A1-206ENST00000471037 LRRC40Q9H9A6 602 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 MTRF1LQ9UGC7 380 aaKnown RBP8.94□□□□□ -0.98
SF3A1-206ENST00000471037 FAM153AQ9UHL3 310 aa8.94□□□□□ -0.98
SF3A1-206ENST00000471037 PCYT1BQ9Y5K3 369 aaPredicted RBP8.94□□□□□ -0.98
SF3A1-206ENST00000471037 MN1Q10571 1320 aaPredicted RBP8.94□□□□□ -0.98
SF3A1-206ENST00000471037 KIR2DS5A0A0G2JLQ3 304 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 A0A0G2JNG1 304 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 A0A0U1RQS6 177 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 LILRA5A6NI73 299 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 KIR2DS3K7RE56 304 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 AP3B1O00203 1094 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 STK17BO94768 372 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 SUN1O94901 812 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 PRKAR1AP10644 381 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 F3P13726 295 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 SLC2A4P14672 509 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 CA4P22748 312 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 STAT5AP42229 794 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 PLTPP55058 493 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 VSNL1P62760 191 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 DSC2Q02487 901 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 NIPAL4Q0D2K0 466 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 SEPT6Q14141 434 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 NAA30Q147X3 362 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-206ENST00000471037 KIR2DS5Q14953 304 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 TRADDQ15628 312 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 IGFBP7Q16270 282 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 KCTD19Q17RG1 926 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-206ENST00000471037 LACTB2Q53H82 288 aaPredicted RBP8.93□□□□□ -0.98
SF3A1-206ENST00000471037 SNAP47Q5SQN1 464 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 KCTD11Q693B1 232 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 IYDQ6PHW0 289 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 ZDHHC24Q6UX98 284 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 LYSMD3Q7Z3D4 306 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 LINC00523Q86TU6 105 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 UNC5BQ8IZJ1 945 aa8.93□□□□□ -0.98
SF3A1-206ENST00000471037 TAB3Q8N5C8 712 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms