RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ABHD17AQ96GS6 310 aa17.11■□□□□ 0.33
COL7A1-208ENST00000470076 FCRL4Q96PJ5 515 aa17.11■□□□□ 0.33
COL7A1-208ENST00000470076 CD180Q99467 661 aa17.11■□□□□ 0.33
COL7A1-208ENST00000470076 ZNF71Q9NQZ8 489 aaPredicted RBP17.11■□□□□ 0.33
COL7A1-208ENST00000470076 PADI1Q9ULC6 663 aa17.11■□□□□ 0.33
COL7A1-208ENST00000470076 KCNMB2Q9Y691 235 aa17.11■□□□□ 0.33
COL7A1-208ENST00000470076 IGHV5-51A0A0C4DH38 117 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 MGAT4DA6NG13 374 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 C2orf81A6NN90 581 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 H7C0C1 242 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 PRAMEF1O95521 474 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 RECKO95980 971 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 AGTP01019 485 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 MTHFD1P11586 935 aaKnown RBP17.1■□□□□ 0.33
COL7A1-208ENST00000470076 LPOP22079 712 aaPredicted RBP17.1■□□□□ 0.33
COL7A1-208ENST00000470076 RBL1P28749 1068 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 CA5AP35218 305 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 ATP5OP48047 213 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 COPS2P61201 443 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 PPP1CAP62136 330 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 TUBB3Q13509 450 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 SPA17Q15506 151 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 TAF1AQ15573 450 aaPredicted RBP17.1■□□□□ 0.33
COL7A1-208ENST00000470076 SKIDA1Q1XH10 827 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 FNBP1LQ5T0N5 605 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 CCDC181Q5TID7 509 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 DAAM2Q86T65 1068 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 KMT5CQ86Y97 462 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 CCDC170Q8IYT3 715 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 TC2NQ8N9U0 490 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 ZFPM2Q8WW38 1151 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 KRT35Q92764 455 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 RNF31Q96EP0 1072 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 FICDQ9BVA6 458 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 HEMGNQ9BXL5 484 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 EPN3Q9H201 632 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 IMP3Q9NV31 184 aaKnown RBP17.1■□□□□ 0.33
COL7A1-208ENST00000470076 RARRES3Q9UL19 164 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 ACSL5Q9ULC5 683 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 POLHQ9Y253 713 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 PCDHGA6Q9Y5G7 932 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 PCDHA13Q9Y5I0 950 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 LRRK2Q5S007 2527 aa17.1■□□□□ 0.33
COL7A1-208ENST00000470076 C5orf60A6NFR6 353 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 TLCD2A6NGC4 264 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 KATNA1O75449 491 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 PYGMP11217 842 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 PBLDP30039 288 aaPredicted RBP17.09■□□□□ 0.33
COL7A1-208ENST00000470076 ARL4DP49703 201 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 ACY1Q03154 408 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 ERV3-1Q14264 604 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 PTPRCAPQ14761 206 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 LACTB2Q53H82 288 aaPredicted RBP17.09■□□□□ 0.33
COL7A1-208ENST00000470076 DNTTIP2Q5QJE6 756 aaKnown RBP17.09■□□□□ 0.33
COL7A1-208ENST00000470076 RANBP10Q6VN20 620 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 OR2L2Q8NH16 312 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 ASB8Q9H765 288 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 LHX9Q9NQ69 397 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 EFR3BQ9Y2G0 817 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 AAR2Q9Y312 384 aaKnown RBP17.09■□□□□ 0.33
COL7A1-208ENST00000470076 ARL5AQ9Y689 179 aa17.09■□□□□ 0.33
COL7A1-208ENST00000470076 OR5K3A6NET4 321 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 C21orf140B9A014 251 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 CREG1O75629 220 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 SRP72O76094 671 aaKnown RBP17.08■□□□□ 0.32
COL7A1-208ENST00000470076 TIAF1O95411 115 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 FOLR1P15328 257 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 ADRA1AP35348 466 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 CYLC1P35663 651 aaPredicted RBP17.08■□□□□ 0.32
COL7A1-208ENST00000470076 PDE1BQ01064 536 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 DNASE1L3Q13609 305 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 PRPSAP1Q14558 356 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 BCL7AQ4VC05 210 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 SARM1Q6SZW1 724 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 DET1Q7L5Y6 550 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 OOSP2Q86WS3 158 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 CDKL3Q8IVW4 592 aaPredicted RBP17.08■□□□□ 0.32
COL7A1-208ENST00000470076 CARFQ8N187 725 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 OR4K2Q8NGD2 314 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 ACTL9Q8TC94 416 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 COL26A1Q96A83 441 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 CALR3Q96L12 384 aaKnown RBP17.08■□□□□ 0.32
COL7A1-208ENST00000470076 LINC00615Q96LM1 132 aaPredicted RBP17.08■□□□□ 0.32
COL7A1-208ENST00000470076 C12orf66Q96MD2 445 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 INSM2Q96T92 566 aaPredicted RBP17.08■□□□□ 0.32
COL7A1-208ENST00000470076 MAP3K3Q99759 626 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 GORASP1Q9BQQ3 440 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 TRIM5Q9C035 493 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 WWP1Q9H0M0 922 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 FGF21Q9NSA1 209 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 HRASLS2Q9NWW9 162 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 TFR2Q9UP52 801 aa17.08■□□□□ 0.32
COL7A1-208ENST00000470076 CFAP20Q9Y6A4 193 aaKnown RBP17.08■□□□□ 0.32
COL7A1-208ENST00000470076 DOPEY2Q9Y3R5 2298 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 UBA6A0AVT1 1052 aaPredicted RBP17.07■□□□□ 0.32
COL7A1-208ENST00000470076 MKRN2OSH3BPM6 223 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 STK10O94804 968 aaKnown RBP17.07■□□□□ 0.32
COL7A1-208ENST00000470076 CRTAMO95727 393 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 SLC35G4P0C7Q5 338 aa17.07■□□□□ 0.32
COL7A1-208ENST00000470076 RALBP11234 206 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms