RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 SPDYE1Q8NFV5 336 aaPredicted RBP12.99□□□□□ -0.33
CPSF4-210ENST00000469897 OR4K2Q8NGD2 314 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 UBXN4Q92575 508 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 SLC41A2Q96JW4 573 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 MAP3K3Q99759 626 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 GORASP1Q9BQQ3 440 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 TRIM5Q9C035 493 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 WWP1Q9H0M0 922 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 EPN3Q9H201 632 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 FAM96AQ9H5X1 160 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 ASB8Q9H765 288 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 AKIRIN1Q9H9L7 192 aaPredicted RBP12.99□□□□□ -0.33
CPSF4-210ENST00000469897 PDE7BQ9NP56 450 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 HRASLS2Q9NWW9 162 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 SEMA5BQ9P283 1151 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 FAM8A1Q9UBU6 413 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 SCN8AQ9UQD0 1980 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 AHCTF1Q8WYP5 2266 aa12.99□□□□□ -0.33
CPSF4-210ENST00000469897 ARHGEF17Q96PE2 2063 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-210ENST00000469897 FLNBO75369 2602 aaKnown RBP12.98□□□□□ -0.33
CPSF4-210ENST00000469897 UBA6A0AVT1 1052 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-210ENST00000469897 PIPSLA2A3N6 862 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 MGAT4DA6NG13 374 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 C2orf81A6NN90 581 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 K7EM74 188 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 APOC4-APOC2K7ER74 178 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 ANXA9O76027 345 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 SRP72O76094 671 aaKnown RBP12.98□□□□□ -0.33
CPSF4-210ENST00000469897 APOC2P02655 101 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 POLBP06746 335 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 MTHFD1P11586 935 aaKnown RBP12.98□□□□□ -0.33
CPSF4-210ENST00000469897 ARL4DP49703 201 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 GEMP55040 296 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 TMPRSS15P98073 1019 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 TUBB3Q13509 450 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 SEPT6Q14141 434 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 PLCL1Q15111 1095 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 SPA17Q15506 151 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 TAF1AQ15573 450 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-210ENST00000469897 ANKRD20A2Q5SQ80 823 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 ANKRD20A1Q5TYW2 823 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 ANKRD20A3Q5VUR7 823 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 FAM199XQ6PEV8 388 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-210ENST00000469897 KLHL35Q6PF15 583 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 CFAP206Q8IYR0 622 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 CCDC170Q8IYT3 715 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 COL26A1Q96A83 441 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 ZNF514Q96K75 400 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-210ENST00000469897 FAM118BQ9BPY3 351 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 LHX9Q9NQ69 397 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 FKBPLQ9UIM3 349 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 RARRES3Q9UL19 164 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 PCDHA3Q9Y5H8 950 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 DUSP10Q9Y6W6 482 aa12.98□□□□□ -0.33
CPSF4-210ENST00000469897 ASH1LQ9NR48 2969 aaKnown RBP12.98□□□□□ -0.33
CPSF4-210ENST00000469897 SDK2Q58EX2 2172 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 CDC14CA4D256 554 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 OR6C74A6NCV1 312 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 RCCD1A6NED2 376 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 OR5K3A6NET4 321 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 GOLGA6L3A6NEY3 463 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 C5orf60A6NFR6 353 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 CREG1O75629 220 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 PRAMEF1O95521 474 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 MT-ND3P03897 115 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 EBLN1P0CF75 366 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 NR1D1P20393 614 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 ADRA1AP35348 466 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 CASRP41180 1078 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 NAP1L1P55209 391 aaKnown RBP12.97□□□□□ -0.33
CPSF4-210ENST00000469897 EIF3EP60228 445 aaKnown RBP12.97□□□□□ -0.33
CPSF4-210ENST00000469897 XIAPP98170 497 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 OTUD4Q01804 1114 aaKnown RBP12.97□□□□□ -0.33
CPSF4-210ENST00000469897 ACY1Q03154 408 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 SPARCL1Q14515 664 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 PRPSAP1Q14558 356 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 GSE1Q14687 1217 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 DNTTIP2Q5QJE6 756 aaKnown RBP12.97□□□□□ -0.33
CPSF4-210ENST00000469897 ITPRIPL1Q6GPH6 555 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 C11orf63Q6NUN7 778 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 AADACL2Q6P093 401 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 DUS1LQ6P1R4 473 aaKnown RBP12.97□□□□□ -0.33
CPSF4-210ENST00000469897 DARS2Q6PI48 645 aaKnown RBP12.97□□□□□ -0.33
CPSF4-210ENST00000469897 FBXO38Q6PIJ6 1188 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 LILRA3Q8N6C8 439 aaPredicted RBP12.97□□□□□ -0.33
CPSF4-210ENST00000469897 OR2L2Q8NH16 312 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 ACTL9Q8TC94 416 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 CT55Q8WUE5 264 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 C12orf66Q96MD2 445 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 RUFY1Q96T51 708 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 TWSG1Q9GZX9 223 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 GBA3Q9H227 469 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 FGF21Q9NSA1 209 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 SMOXQ9NWM0 555 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 ANAPC2Q9UJX6 822 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 KCND3Q9UK17 655 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 ACSL5Q9ULC5 683 aa12.97□□□□□ -0.33
CPSF4-210ENST00000469897 AAR2Q9Y312 384 aaKnown RBP12.97□□□□□ -0.33
CPSF4-210ENST00000469897 DDX3YO15523 660 aaKnown RBP12.96□□□□□ -0.33
CPSF4-210ENST00000469897 KCNN4O15554 427 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms