RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 USP27XA6NNY8 438 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 AGRPO00253 132 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 POP7O75817 140 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 SUN1O94901 812 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 CCL4P13236 92 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 MC4RP32245 332 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 CTSCP53634 463 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 BASP1P80723 227 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 HHEXQ03014 270 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 KCNC4Q03721 635 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 NFATC2Q13469 925 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 SEMA5AQ13591 1074 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 TRIP13Q15645 432 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 SEPT7Q16181 437 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 C4orf22Q6V702 233 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 MICALCLQ6ZW33 695 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 TAS2R42Q7RTR8 314 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 ZNF761Q86XN6 746 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 IL22RA1Q8N6P7 574 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 RCBTB1Q8NDN9 531 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 DDHD1Q8NEL9 900 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 SLC37A2Q8TED4 501 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 COG1Q8WTW3 980 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 STYXQ8WUJ0 223 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 NAT14Q8WUY8 206 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 NKD1Q969G9 470 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 MAGOHBQ96A72 148 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 CDKN2AIPNLQ96HQ2 116 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 CATSPER2Q96P56 530 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 OSBPL9Q96SU4 736 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 TIMM29Q9BSF4 260 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 TRIT1Q9H3H1 467 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 UCK1Q9HA47 277 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 NLE1Q9NVX2 485 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 SLC39A1Q9NY26 324 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 SMARCAL1Q9NZC9 954 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 CRLS1Q9UJA2 301 aa13.81□□□□□ -0.2
CCHCR1-211ENST00000467553 PDZK1P1A8MUH7 402 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 SLC28A2O43868 658 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 F3P13726 295 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 VCLP18206 1134 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 ITGALP20701 1170 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 IDSP22304 550 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 RPL10P27635 214 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 MAP4P27816 1152 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 PBLDP30039 288 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 CDKN1CP49918 316 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 TBR1Q16650 682 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 SKIDA1Q1XH10 827 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 FNBP1LQ5T0N5 605 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 NKAIN2Q5VXU1 208 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 CEACAM20Q6UY09 585 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 ARHGAP22Q7Z5H3 698 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 SNX20Q7Z614 316 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 AMZ2Q86W34 360 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 EXTL1Q92935 676 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 ULK4Q96C45 1275 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 DCUN1D1Q96GG9 259 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 NAP1L3Q99457 506 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 ZMYND15Q9H091 742 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 CLMPQ9H6B4 373 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 FBXO8Q9NRD0 319 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 GEMIN8Q9NWZ8 242 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 SCHIP1Q9P0W5 487 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 TUBD1Q9UJT1 453 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 PYCARDQ9ULZ3 195 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 B3GALT1Q9Y5Z6 326 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 SPTA1P02549 2419 aa13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 TLN1Q9Y490 2541 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-211ENST00000467553 MYO18BQ8IUG5 2567 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 ZNF106Q9H2Y7 1883 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 PGRMC1O00264 195 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 ZNF185O15231 689 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 WISP1O95388 367 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 KRT14P02533 472 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 PRSS56P0CW18 603 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 RALBP11234 206 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 CSF2RBP32927 897 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 VPS41P49754 854 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 DRG2P55039 364 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 GNG11P61952 73 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 MC2RQ01718 297 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 GPR33Q49SQ1 333 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 BORAQ6PGQ7 559 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 C11orf96Q7Z7L8 435 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 VASH2Q86V25 355 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 PLXDC1Q8IUK5 500 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 TRIM48Q8IWZ4 208 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 CACNA2D3Q8IZS8 1091 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 BEND7Q8N7W2 519 aaPredicted RBP13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 BMPERQ8N8U9 685 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 ART4Q93070 314 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 C19orf43Q9BQ61 176 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 SLC12A9Q9BXP2 914 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 CASS4Q9NQ75 786 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 SMOXQ9NWM0 555 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 CPNE7Q9UBL6 633 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 FAM8A1Q9UBU6 413 aa13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 TTC7AQ9ULT0 858 aaPredicted RBP13.79□□□□□ -0.2
CCHCR1-211ENST00000467553 SNX12Q9UMY4 172 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms