RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 PRICKLE1Q96MT3 831 aaPredicted RBP8.61□□□□□ -1.03
HPS4-209ENST00000466781 MNTQ99583 582 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 PTPN18Q99952 460 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 DPYSL5Q9BPU6 564 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 FKBP14Q9NWM8 211 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 GTF2IRD1Q9UHL9 959 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 ARL5CA6NH57 179 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 TMEM150CB9EJG8 249 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 AREL1O15033 823 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 SCAMP1O15126 338 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 HCN1O60741 890 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 TM7SF2O76062 418 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 LYPLA2O95372 231 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 FADS2O95864 444 aaKnown RBP8.61□□□□□ -1.03
HPS4-209ENST00000466781 SERPINA6P08185 405 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 HTR7P34969 479 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 DGKEP52429 567 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 HSPB3Q12988 150 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 DCTN2Q13561 401 aaKnown RBP8.61□□□□□ -1.03
HPS4-209ENST00000466781 DCST1Q5T197 706 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 BICRALQ6AI39 1079 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 SLC8B1Q6J4K2 584 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 LINGO4Q6UY18 593 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 FAM71AQ8IYT1 594 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 DCAKDQ8WVC6 231 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 RASSF5Q8WWW0 418 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 PGM2Q96G03 612 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 TSSK3Q96PN8 268 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 GTPBP2Q9BX10 602 aaKnown RBP8.61□□□□□ -1.03
HPS4-209ENST00000466781 RAB11FIP5Q9BXF6 653 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 FAM83DQ9H4H8 585 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 PDZD7Q9H5P4 517 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 NMUR1Q9HB89 426 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 B3GAT2Q9NPZ5 323 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 A0A075B6Q4 140 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 A0A0J9YYE9 177 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 RENP00797 406 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 RHOQP17081 205 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 AQP1P29972 269 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 POLR2JP52435 117 aaKnown RBP8.61□□□□□ -1.03
HPS4-209ENST00000466781 CYP4F8P98187 520 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 LDLRAP1Q5SW96 308 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 PHF19Q5T6S3 580 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 STRADAQ7RTN6 431 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 SFRP1Q8N474 314 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 OR2T12Q8NG77 320 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 CKAP2Q8WWK9 683 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 NDRG1Q92597 394 aaKnown RBP8.61□□□□□ -1.03
HPS4-209ENST00000466781 SHDQ96IW2 340 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 FAM129BQ96TA1 746 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 CIDEBQ9UHD4 219 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 STOML2Q9UJZ1 356 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 TRAF6Q9Y4K3 522 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 C5orf60A6NFR6 353 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 SLC31A1O15431 190 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 GSC2O15499 205 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 ALDH4A1P30038 563 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 MTHFRP42898 656 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 CEBPGP53567 150 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 NOMO3P69849 1222 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 OLR1P78380 273 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 OC90Q02509 493 aaPredicted RBP8.61□□□□□ -1.03
HPS4-209ENST00000466781 RFWD3Q6PCD5 774 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 ABHD13Q7L211 337 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 SLC22A15Q8IZD6 547 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 COX18Q8N8Q8 333 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 TP53INP1Q96A56 240 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 C1GALT1C1Q96EU7 318 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 HOPXQ9BPY8 73 aaPredicted RBP8.61□□□□□ -1.03
HPS4-209ENST00000466781 ATG10Q9H0Y0 220 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 L2HGDHQ9H9P8 463 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 SERINC1Q9NRX5 453 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 PDP1Q9P0J1 537 aaPredicted RBP8.61□□□□□ -1.03
HPS4-209ENST00000466781 NR2E1Q9Y466 385 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 A0A0U1RQJ8 604 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 PRAMEF1O95521 474 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 CCNE2O96020 404 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 AHCYP23526 432 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 NRG1Q02297 640 aaPredicted RBP8.61□□□□□ -1.03
HPS4-209ENST00000466781 LIPEQ05469 1076 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 GTF2H2Q13888 395 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 EEF1DP3Q658K8 133 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 CCSAPQ6IQ19 270 aaPredicted RBP8.61□□□□□ -1.03
HPS4-209ENST00000466781 GTF2H2CQ6P1K8 395 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 GALNT5Q7Z7M9 940 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 ADGRG6Q86SQ4 1221 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 GPALPP1Q8IXQ4 340 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 KCTD15Q96SI1 283 aaPredicted RBP8.61□□□□□ -1.03
HPS4-209ENST00000466781 MGME1Q9BQP7 344 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 OSBPL11Q9BXB4 747 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 COL20A1Q9P218 1284 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 EGFL7Q9UHF1 273 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 PCYOX1Q9UHG3 505 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 GABRQQ9UN88 632 aa8.61□□□□□ -1.03
HPS4-209ENST00000466781 NDST3O95803 873 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 TNFP01375 233 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 ANXA4P09525 319 aaPredicted RBP8.6□□□□□ -1.03
HPS4-209ENST00000466781 CPN2P22792 545 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 KIR3DL1P43629 444 aa8.6□□□□□ -1.03
HPS4-209ENST00000466781 DLG2Q15700 870 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms