RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 ARHGEF18Q6ZSZ5 1173 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 OOSP2Q86WS3 158 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 PPP1R3BQ86XI6 285 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 TXLNBQ8N3L3 684 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 GALNT6Q8NCL4 622 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 DTX3LQ8TDB6 740 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 UBXN4Q92575 508 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 ULK4Q96C45 1275 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 C12orf66Q96MD2 445 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 PANX2Q96RD6 677 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 FAM118BQ9BPY3 351 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 TMPRSS11EQ9UL52 423 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 WDR37Q9Y2I8 494 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 PCDHA3Q9Y5H8 950 aa17.17■□□□□ 0.34
COL7A1-206ENST00000466591 CFAP20Q9Y6A4 193 aaKnown RBP17.17■□□□□ 0.34
COL7A1-206ENST00000466591 C5orf60A6NFR6 353 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 MAP3K7O43318 606 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 KALRNO60229 2985 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 WISP1O95388 367 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 ITGALP20701 1170 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 FECHP22830 423 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 PSMB4P28070 264 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 STAT5AP42229 794 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 DMPKQ09013 629 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 PRKAA1Q13131 559 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 TUBB3Q13509 450 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 MAP7Q14244 749 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 PTPRCAPQ14761 206 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 TIPARPQ7Z3E1 657 aaKnown RBP17.16■□□□□ 0.34
COL7A1-206ENST00000466591 PRSS42Q7Z5A4 293 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 PTRH1Q86Y79 214 aaKnown RBP17.16■□□□□ 0.34
COL7A1-206ENST00000466591 UBL4BQ8N7F7 174 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 WWP1Q9H0M0 922 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 SMOXQ9NWM0 555 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 SOHLH2Q9NX45 425 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 FKBPLQ9UIM3 349 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 RARRES3Q9UL19 164 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 ACSL5Q9ULC5 683 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 COLEC10Q9Y6Z7 277 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 ZNF462Q96JM2 2506 aa17.16■□□□□ 0.34
COL7A1-206ENST00000466591 KLHL33A6NCF5 533 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 PJA2O43164 708 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 KIF1CO43896 1103 aaKnown RBP17.15■□□□□ 0.34
COL7A1-206ENST00000466591 SRP72O76094 671 aaKnown RBP17.15■□□□□ 0.34
COL7A1-206ENST00000466591 POLBP06746 335 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 PYGMP11217 842 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 MTHFD1P11586 935 aaKnown RBP17.15■□□□□ 0.34
COL7A1-206ENST00000466591 HADHAP40939 763 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 C11orf96Q7Z7L8 435 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 GPR150Q8NGU9 434 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 C9orf43Q8TAL5 461 aaPredicted RBP17.15■□□□□ 0.34
COL7A1-206ENST00000466591 CCDC110Q8TBZ0 833 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 APOBEC4Q8WW27 367 aaKnown RBP17.15■□□□□ 0.34
COL7A1-206ENST00000466591 TBL1YQ9BQ87 522 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 VPS37BQ9H9H4 285 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 HRASLS2Q9NWW9 162 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 SIDT1Q9NXL6 827 aaKnown RBP17.15■□□□□ 0.34
COL7A1-206ENST00000466591 IL17BQ9UHF5 180 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 KCND3Q9UK17 655 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 CROTQ9UKG9 612 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 COL6A6A6NMZ7 2263 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 ATMQ13315 3056 aa17.15■□□□□ 0.34
COL7A1-206ENST00000466591 MGAT4DA6NG13 374 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 DLGAP3O95886 979 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 ZNF28P17035 718 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 ZNF75DP51815 510 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 ACY1Q03154 408 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 TMTC4Q5T4D3 741 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 FAM83HQ6ZRV2 1179 aaPredicted RBP17.14■□□□□ 0.33
COL7A1-206ENST00000466591 PEX26Q7Z412 305 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 CFAP206Q8IYR0 622 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 SYCE1Q8N0S2 351 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 HEXDCQ8WVB3 486 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 SPATA13Q96N96 652 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 COPS8Q99627 209 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 FANCEQ9HB96 536 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 EPHA6Q9UF33 1036 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 FEZ2Q9UHY8 353 aaPredicted RBP17.14■□□□□ 0.33
COL7A1-206ENST00000466591 TUBD1Q9UJT1 453 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 AMFRQ9UKV5 643 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 PADI1Q9ULC6 663 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 EFR3BQ9Y2G0 817 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 HEBP2Q9Y5Z4 205 aa17.14■□□□□ 0.33
COL7A1-206ENST00000466591 IFRD1O00458 451 aaPredicted RBP17.13■□□□□ 0.33
COL7A1-206ENST00000466591 SPAG6O75602 509 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 ITGB6P18564 788 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 NELFEP18615 380 aaKnown RBP17.13■□□□□ 0.33
COL7A1-206ENST00000466591 CSRP3P50461 194 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 ERV3-1Q14264 604 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 ZRANB3Q5FWF4 1079 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 METRNLQ641Q3 311 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 TAS2R42Q7RTR8 314 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 TTC13Q8NBP0 860 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 OR2L2Q8NH16 312 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 MRFAP1L1Q96HT8 127 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 CD180Q99467 661 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 RAB33BQ9H082 229 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 FAM96AQ9H5X1 160 aa17.13■□□□□ 0.33
COL7A1-206ENST00000466591 ZNF71Q9NQZ8 489 aaPredicted RBP17.13■□□□□ 0.33
COL7A1-206ENST00000466591 KCTD3Q9Y597 815 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms