RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 LRRC74BQ6ZQY2 392 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 FRA10AC1Q70Z53 315 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 MYO1HQ8N1T3 1032 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 PYDC1Q8WXC3 89 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 LATS2Q9NRM7 1088 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 GIMAP2Q9UG22 337 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 EIF2B4Q9UI10 523 aaKnown RBP17.98■□□□□ 0.47
COL9A3-205ENST00000466192 MSRAQ9UJ68 235 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 BTRCQ9Y297 605 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 E2F3O00716 465 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 CRCPO75575 148 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 HLA-EP13747 358 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 VHLP40337 213 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 ETV3P41162 512 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 CCNIQ14094 377 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 TAF11Q15544 211 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 VITQ6UXI7 678 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 SLC26A7Q8TE54 656 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 TUBB1Q9H4B7 451 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 FAM83DQ9H4H8 585 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 WDR41Q9HAD4 459 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 SLC28A3Q9HAS3 691 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 OBP2AQ9NY56 170 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 ZNF225Q9UK10 706 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 PPM1HQ9ULR3 514 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 TIMM22Q9Y584 194 aa17.98■□□□□ 0.47
COL9A3-205ENST00000466192 BAG2O95816 211 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 ALDOCP09972 364 aaKnown RBP17.97■□□□□ 0.47
COL9A3-205ENST00000466192 LINC00032P0C843 101 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 ANPEPP15144 967 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 METAP1P53582 386 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 C18orf21Q32NC0 220 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-205ENST00000466192 SYCE2Q6PIF2 218 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 BNC2Q6ZN30 1099 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-205ENST00000466192 DPPA4Q7L190 304 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 PARS2Q7L3T8 475 aaKnown RBP17.97■□□□□ 0.47
COL9A3-205ENST00000466192 OR9I1Q8NGQ6 314 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 HCAR2Q8TDS4 363 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 HGH1Q9BTY7 390 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 MRGBPQ9NV56 204 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 NMRK1Q9NWW6 199 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 PRPF19Q9UMS4 504 aaKnown RBP17.97■□□□□ 0.47
COL9A3-205ENST00000466192 FFAR2O15552 330 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 XPAP23025 273 aaPredicted RBP17.97■□□□□ 0.47
COL9A3-205ENST00000466192 GCKP35557 465 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 PKNOX1P55347 436 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 DCDC1P59894 354 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 NAA20P61599 178 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 PTK2BQ14289 1009 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 PDGFRLQ15198 375 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 RBBP7Q16576 425 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 MUM1Q2TAK8 710 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 FNDC3BQ53EP0 1204 aaKnown RBP17.97■□□□□ 0.47
COL9A3-205ENST00000466192 DET1Q7L5Y6 550 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 SYVN1Q86TM6 617 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 PGAM4Q8N0Y7 254 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 DLG3Q92796 817 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 SMOXQ9NWM0 555 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 THG1LQ9NWX6 298 aaKnown RBP17.97■□□□□ 0.47
COL9A3-205ENST00000466192 ANGPTL2Q9UKU9 493 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 LRRC42Q9Y546 428 aa17.97■□□□□ 0.47
COL9A3-205ENST00000466192 KPNA3O00505 521 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-205ENST00000466192 FKBP6O75344 327 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 CCR7P32248 378 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 MMP12P39900 470 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 DPP6P42658 865 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 GRIN2CQ14957 1233 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 PHKG1Q16816 387 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 MMEL1Q495T6 779 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 C9orf64Q5T6V5 341 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 RNF148Q8N7C7 305 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 TUBGCP3Q96CW5 907 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 MRPL38Q96DV4 380 aaKnown RBP17.96■□□□□ 0.47
COL9A3-205ENST00000466192 RSRC1Q96IZ7 334 aaKnown RBP17.96■□□□□ 0.47
COL9A3-205ENST00000466192 SERPINI1Q99574 410 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 MRPL1Q9BYD6 325 aaKnown RBP17.96■□□□□ 0.47
COL9A3-205ENST00000466192 FAM126AQ9BYI3 521 aaPredicted RBP17.96■□□□□ 0.47
COL9A3-205ENST00000466192 ZFP14Q9HCL3 533 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 KCTD5Q9NXV2 234 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 ITM2BQ9Y287 266 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 OARD1Q9Y530 152 aa17.96■□□□□ 0.47
COL9A3-205ENST00000466192 RAD51BO15315 384 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 NVLO15381 856 aaKnown RBP17.96■□□□□ 0.46
COL9A3-205ENST00000466192 MTX2O75431 263 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 ESRRBO95718 433 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 MLYCDO95822 493 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 NFKBIAP25963 317 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 MSX2P35548 267 aaPredicted RBP17.96■□□□□ 0.46
COL9A3-205ENST00000466192 THOP1P52888 689 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 HYAL1Q12794 435 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 GRB7Q14451 532 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 RAB30Q15771 203 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 KIF19Q2TAC6 998 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 HNRNPA1L2Q32P51 320 aaKnown RBP17.96■□□□□ 0.46
COL9A3-205ENST00000466192 TTLL9Q3SXZ7 439 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 HENMT1Q5T8I9 393 aaKnown RBP17.96■□□□□ 0.46
COL9A3-205ENST00000466192 PAOXQ6QHF9 649 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 DCBLD1Q8N8Z6 715 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 PDPRQ8NCN5 879 aa17.96■□□□□ 0.46
COL9A3-205ENST00000466192 RIOK2Q9BVS4 552 aaKnown RBP17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms