RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 SRP54P61011 504 aaKnown RBP13.17□□□□□ -0.3
ATF3-208ENST00000465155 HSPA14Q0VDF9 509 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 CSHL1Q14406 222 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 PYCR3Q53H96 274 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 CHST15Q7LFX5 561 aaPredicted RBP13.17□□□□□ -0.3
ATF3-208ENST00000465155 RD3Q7Z3Z2 195 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 C11orf96Q7Z7L8 435 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 IQCHQ86VS3 1027 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 CPNE9Q8IYJ1 553 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 SPATA6LQ8N4H0 392 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 BANPQ8N9N5 519 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 KCTD4Q8WVF5 259 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 ANKRD49Q8WVL7 239 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 ALKBH8Q96BT7 664 aaKnown RBP13.17□□□□□ -0.3
ATF3-208ENST00000465155 SCARF2Q96GP6 870 aaPredicted RBP13.17□□□□□ -0.3
ATF3-208ENST00000465155 APOPT1Q96IL0 206 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 LINC00615Q96LM1 132 aaPredicted RBP13.17□□□□□ -0.3
ATF3-208ENST00000465155 CARS2Q9HA77 564 aaKnown RBP13.17□□□□□ -0.3
ATF3-208ENST00000465155 TM7SF3Q9NS93 570 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 TSR3Q9UJK0 312 aaKnown RBP13.17□□□□□ -0.3
ATF3-208ENST00000465155 PNMA8BQ9ULN7 279 aaPredicted RBP13.17□□□□□ -0.3
ATF3-208ENST00000465155 ANKRD6Q9Y2G4 727 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 GPSM3Q9Y4H4 160 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 PCDHGA2Q9Y5H1 932 aa13.17□□□□□ -0.3
ATF3-208ENST00000465155 TLR4O00206 839 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 SCAMP1O15126 338 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 APOA4P06727 396 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 CCT5P48643 541 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 AFF3P51826 1226 aaKnown RBP13.16□□□□□ -0.3
ATF3-208ENST00000465155 IL2P60568 153 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 OVGP1Q12889 678 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 DLG1Q12959 904 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 SIM2Q14190 667 aaPredicted RBP13.16□□□□□ -0.3
ATF3-208ENST00000465155 INSCQ1MX18 579 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 ALG11Q2TAA5 492 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 TTLL9Q3SXZ7 439 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 SYTL3Q4VX76 610 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 CLEC14AQ86T13 490 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 AMZ2Q86W34 360 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 DCP2Q8IU60 420 aaKnown RBP13.16□□□□□ -0.3
ATF3-208ENST00000465155 CENPLQ8N0S6 344 aaPredicted RBP13.16□□□□□ -0.3
ATF3-208ENST00000465155 PLD6Q8N2A8 252 aaKnown RBP13.16□□□□□ -0.3
ATF3-208ENST00000465155 NKAPQ8N5F7 415 aaKnown RBP13.16□□□□□ -0.3
ATF3-208ENST00000465155 LILRA3Q8N6C8 439 aaPredicted RBP13.16□□□□□ -0.3
ATF3-208ENST00000465155 OR2L2Q8NH16 312 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 EEF1AKMT1Q8WVE0 214 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 ASZ1Q8WWH4 475 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 NXNL1Q96CM4 212 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 LINGO1Q96FE5 620 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 ZC3H10Q96K80 434 aaKnown RBP13.16□□□□□ -0.3
ATF3-208ENST00000465155 UBXN10Q96LJ8 280 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 C1QTNF1Q9BXJ1 281 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 UNKQ9C0B0 810 aaKnown RBP13.16□□□□□ -0.3
ATF3-208ENST00000465155 KCNK9Q9NPC2 374 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 ZNF358Q9NW07 568 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 GULP1Q9UBP9 304 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 SLC23A2Q9UGH3 650 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 DCDC2Q9UHG0 476 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 WDFY4Q6ZS81 3184 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 GON4LQ3T8J9 2241 aa13.16□□□□□ -0.3
ATF3-208ENST00000465155 C17orf113A0A1B0GUU1 675 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 MGAT4DA6NG13 374 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 TYROBPO43914 113 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 GLRA3O75311 464 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 GSTM1P09488 218 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 LTA4HP09960 611 aaKnown RBP13.15□□□□□ -0.3
ATF3-208ENST00000465155 COL6A2P12110 1019 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 ACP5P13686 325 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 DGKAP23743 735 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 CSNK1EP49674 416 aaKnown RBP13.15□□□□□ -0.3
ATF3-208ENST00000465155 RGS4P49798 205 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 ARHGAP8P85298 464 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 GSTM4Q03013 218 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 PPARDQ03181 441 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 FZD2Q14332 565 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 NFE2L1Q14494 772 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 ACSBG2Q5FVE4 666 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 PLEKHS1Q5SXH7 462 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 PRR23BQ6ZRT6 265 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 CDHR3Q6ZTQ4 885 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 HID1Q8IV36 788 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 CFAP206Q8IYR0 622 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 OXR1Q8N573 874 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 HM13Q8TCT9 377 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 TMEM159Q96B96 161 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 TSNARE1Q96NA8 513 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 OR2M4Q96R27 311 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 SELENOSQ9BQE4 189 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 IQCGQ9H095 443 aaKnown RBP13.15□□□□□ -0.3
ATF3-208ENST00000465155 SSU72Q9NP77 194 aaKnown RBP13.15□□□□□ -0.3
ATF3-208ENST00000465155 TMEM74BQ9NUR3 256 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 MKS1Q9NXB0 559 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 KLHL42Q9P2K6 505 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 RUVBL2Q9Y230 463 aaKnown RBP13.15□□□□□ -0.3
ATF3-208ENST00000465155 DNAJC16Q9Y2G8 782 aa13.15□□□□□ -0.3
ATF3-208ENST00000465155 DNMT3AQ9Y6K1 912 aaPredicted RBP13.15□□□□□ -0.3
ATF3-208ENST00000465155 ZFC3H1O60293 1989 aaKnown RBP13.14□□□□□ -0.31
ATF3-208ENST00000465155 SLC5A10A0PJK1 596 aa13.14□□□□□ -0.31
ATF3-208ENST00000465155 TMEM120BA0PK00 339 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms