RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SPATA32Q96LK8 384 aa9.18□□□□□ -0.94
APP-213ENST00000464867 CFAP57Q96MR6 1250 aa9.18□□□□□ -0.94
APP-213ENST00000464867 KREMEN1Q96MU8 473 aa9.18□□□□□ -0.94
APP-213ENST00000464867 DPH2Q9BQC3 489 aaPredicted RBP9.18□□□□□ -0.94
APP-213ENST00000464867 CINPQ9BW66 212 aaPredicted RBP9.18□□□□□ -0.94
APP-213ENST00000464867 KLC2Q9H0B6 622 aa9.18□□□□□ -0.94
APP-213ENST00000464867 ENKD1Q9H0I2 346 aa9.18□□□□□ -0.94
APP-213ENST00000464867 ACP6Q9NPH0 428 aa9.18□□□□□ -0.94
APP-213ENST00000464867 CD84Q9UIB8 345 aa9.18□□□□□ -0.94
APP-213ENST00000464867 EDARQ9UNE0 448 aa9.18□□□□□ -0.94
APP-213ENST00000464867 RPH3AQ9Y2J0 694 aaPredicted RBP9.18□□□□□ -0.94
APP-213ENST00000464867 DOCK10Q96BY6 2186 aa9.17□□□□□ -0.94
APP-213ENST00000464867 SPTBP11277 2137 aa9.17□□□□□ -0.94
APP-213ENST00000464867 CCDC88CQ9P219 2028 aa9.17□□□□□ -0.94
APP-213ENST00000464867 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.17□□□□□ -0.94
APP-213ENST00000464867 KIAA1324LA8MWY0 1029 aaPredicted RBP9.17□□□□□ -0.94
APP-213ENST00000464867 DNAJC6O75061 913 aa9.17□□□□□ -0.94
APP-213ENST00000464867 ALX3O95076 343 aa9.17□□□□□ -0.94
APP-213ENST00000464867 EPHB2P29323 1055 aa9.17□□□□□ -0.94
APP-213ENST00000464867 SCNN1AP37088 669 aa9.17□□□□□ -0.94
APP-213ENST00000464867 FOLR3P41439 243 aa9.17□□□□□ -0.94
APP-213ENST00000464867 SCNN1BP51168 640 aa9.17□□□□□ -0.94
APP-213ENST00000464867 ATP11AP98196 1134 aa9.17□□□□□ -0.94
APP-213ENST00000464867 ADCY2Q08462 1091 aa9.17□□□□□ -0.94
APP-213ENST00000464867 NSUN2Q08J23 767 aaKnown RBP eCLIP9.17□□□□□ -0.94
APP-213ENST00000464867 AIMP2Q13155 320 aaKnown RBP9.17□□□□□ -0.94
APP-213ENST00000464867 PTPN20Q4JDL3 420 aa9.17□□□□□ -0.94
APP-213ENST00000464867 DNTTIP2Q5QJE6 756 aaKnown RBP9.17□□□□□ -0.94
APP-213ENST00000464867 LCN10Q6JVE6 187 aa9.17□□□□□ -0.94
APP-213ENST00000464867 SYTL1Q8IYJ3 562 aa9.17□□□□□ -0.94
APP-213ENST00000464867 NDUFAF2Q8N183 169 aa9.17□□□□□ -0.94
APP-213ENST00000464867 SLC38A9Q8NBW4 561 aa9.17□□□□□ -0.94
APP-213ENST00000464867 LMO3Q8TAP4 145 aa9.17□□□□□ -0.94
APP-213ENST00000464867 NR4A3Q92570 626 aa9.17□□□□□ -0.94
APP-213ENST00000464867 NINJ1Q92982 152 aa9.17□□□□□ -0.94
APP-213ENST00000464867 C18orf8Q96DM3 657 aa9.17□□□□□ -0.94
APP-213ENST00000464867 FAM81BQ96LP2 452 aa9.17□□□□□ -0.94
APP-213ENST00000464867 RBSNQ9H1K0 784 aa9.17□□□□□ -0.94
APP-213ENST00000464867 PDCL3Q9H2J4 239 aa9.17□□□□□ -0.94
APP-213ENST00000464867 CATSPERBQ9H7T0 1116 aa9.17□□□□□ -0.94
APP-213ENST00000464867 POT1Q9NUX5 634 aa9.17□□□□□ -0.94
APP-213ENST00000464867 P4HTMQ9NXG6 502 aa9.17□□□□□ -0.94
APP-213ENST00000464867 SEC14L3Q9UDX4 400 aa9.17□□□□□ -0.94
APP-213ENST00000464867 GPN3Q9UHW5 284 aaPredicted RBP9.17□□□□□ -0.94
APP-213ENST00000464867 PCDHA7Q9UN72 937 aa9.17□□□□□ -0.94
APP-213ENST00000464867 NCOA6Q14686 2063 aaPredicted RBP9.17□□□□□ -0.94
APP-213ENST00000464867 PDZK1P1A8MUH7 402 aa9.16□□□□□ -0.94
APP-213ENST00000464867 FOXO6A8MYZ6 492 aa9.16□□□□□ -0.94
APP-213ENST00000464867 FAM72CH0Y354 149 aa9.16□□□□□ -0.94
APP-213ENST00000464867 TRAFD1O14545 582 aaPredicted RBP9.16□□□□□ -0.94
APP-213ENST00000464867 MTA2O94776 668 aa9.16□□□□□ -0.94
APP-213ENST00000464867 CPP00450 1065 aa9.16□□□□□ -0.94
APP-213ENST00000464867 ATP1A1P05023 1023 aaKnown RBP9.16□□□□□ -0.94
APP-213ENST00000464867 CYP2A7P20853 494 aa9.16□□□□□ -0.94
APP-213ENST00000464867 ADSLP30566 484 aaPredicted RBP9.16□□□□□ -0.94
APP-213ENST00000464867 FLT3P36888 993 aa9.16□□□□□ -0.94
APP-213ENST00000464867 RENBPP51606 427 aa9.16□□□□□ -0.94
APP-213ENST00000464867 TDGF1P3P51864 188 aa9.16□□□□□ -0.94
APP-213ENST00000464867 AP1S1P61966 158 aa9.16□□□□□ -0.94
APP-213ENST00000464867 GPR19Q15760 415 aa9.16□□□□□ -0.94
APP-213ENST00000464867 LONRF1Q17RB8 773 aa9.16□□□□□ -0.94
APP-213ENST00000464867 CCDC40Q4G0X9 1142 aa9.16□□□□□ -0.94
APP-213ENST00000464867 FAM72AQ5TYM5 149 aa9.16□□□□□ -0.94
APP-213ENST00000464867 FAM72DQ6L9T8 149 aa9.16□□□□□ -0.94
APP-213ENST00000464867 SPOCD1Q6ZMY3 1216 aa9.16□□□□□ -0.94
APP-213ENST00000464867 USP45Q70EL2 814 aa9.16□□□□□ -0.94
APP-213ENST00000464867 FAM72BQ86X60 149 aa9.16□□□□□ -0.94
APP-213ENST00000464867 D2HGDHQ8N465 521 aa9.16□□□□□ -0.94
APP-213ENST00000464867 AOPEPQ8N6M6 819 aa9.16□□□□□ -0.94
APP-213ENST00000464867 MSANTD4Q8NCY6 345 aa9.16□□□□□ -0.94
APP-213ENST00000464867 OR1N1Q8NGS0 311 aa9.16□□□□□ -0.94
APP-213ENST00000464867 ZNF501Q96CX3 271 aaPredicted RBP9.16□□□□□ -0.94
APP-213ENST00000464867 CXorf40BQ96DE9 158 aa9.16□□□□□ -0.94
APP-213ENST00000464867 CD180Q99467 661 aa9.16□□□□□ -0.94
APP-213ENST00000464867 ABCG8Q9H221 673 aa9.16□□□□□ -0.94
APP-213ENST00000464867 NOL6Q9H6R4 1146 aaKnown RBP9.16□□□□□ -0.94
APP-213ENST00000464867 ACTR5Q9H9F9 607 aaPredicted RBP9.16□□□□□ -0.94
APP-213ENST00000464867 CBX8Q9HC52 389 aa9.16□□□□□ -0.94
APP-213ENST00000464867 PLCB1Q9NQ66 1216 aa9.16□□□□□ -0.94
APP-213ENST00000464867 DLL4Q9NR61 685 aa9.16□□□□□ -0.94
APP-213ENST00000464867 KLC4Q9NSK0 619 aa9.16□□□□□ -0.94
APP-213ENST00000464867 CCM2LQ9NUG4 571 aaPredicted RBP9.16□□□□□ -0.94
APP-213ENST00000464867 SOHLH2Q9NX45 425 aa9.16□□□□□ -0.94
APP-213ENST00000464867 SEMA5BQ9P283 1151 aa9.16□□□□□ -0.94
APP-213ENST00000464867 TNFRSF10DQ9UBN6 386 aa9.16□□□□□ -0.94
APP-213ENST00000464867 AKAP6Q13023 2319 aa9.15□□□□□ -0.94
APP-213ENST00000464867 TLCD2A6NGC4 264 aa9.15□□□□□ -0.94
APP-213ENST00000464867 WASH4PA8MWX3 477 aa9.15□□□□□ -0.94
APP-213ENST00000464867 GOLGA8SH3BPF8 625 aa9.15□□□□□ -0.94
APP-213ENST00000464867 J3KR12 359 aa9.15□□□□□ -0.94
APP-213ENST00000464867 PRAMEF11O60813 436 aa9.15□□□□□ -0.94
APP-213ENST00000464867 SOCS5O75159 536 aa9.15□□□□□ -0.94
APP-213ENST00000464867 ZBTB11O95625 1053 aaPredicted RBP9.15□□□□□ -0.94
APP-213ENST00000464867 SOD1P00441 154 aa9.15□□□□□ -0.94
APP-213ENST00000464867 CRYABP02511 175 aaKnown RBP9.15□□□□□ -0.94
APP-213ENST00000464867 CAPN1P07384 714 aa9.15□□□□□ -0.94
APP-213ENST00000464867 HBQ1P09105 142 aa9.15□□□□□ -0.94
APP-213ENST00000464867 RORAP35398 523 aa9.15□□□□□ -0.94
APP-213ENST00000464867 RGRP47804 291 aa9.15□□□□□ -0.94
APP-213ENST00000464867 MEOX1P50221 254 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms