RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ALDH3A2P51648 485 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 ZNF41P51814 821 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-208ENST00000464001 RAD23AP54725 363 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 FOXM1Q08050 763 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 NAE1Q13564 534 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 TMEM35AQ53FP2 167 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 ARHGAP17Q68EM7 881 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 DUS1LQ6P1R4 473 aaKnown RBP3.94□□□□□ -1.78
ITGB1-208ENST00000464001 ABRAXAS1Q6UWZ7 409 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 PIWIL3Q7Z3Z3 882 aaKnown RBP3.94□□□□□ -1.78
ITGB1-208ENST00000464001 GLRX5Q86SX6 157 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 UNC45BQ8IWX7 931 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 CNTROBQ8N137 903 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 WDTC1Q8N5D0 677 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 SPC24Q8NBT2 197 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 ZCCHC10Q8TBK6 192 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 KRT35Q92764 455 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 ZNF524Q96C55 264 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 SCRN2Q96FV2 425 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 ST6GAL2Q96JF0 529 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 SLC41A2Q96JW4 573 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 QRFPRQ96P65 431 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 TMEM237Q96Q45 408 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 FAM110AQ9BQ89 295 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 FUZQ9BT04 418 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 ACAT2Q9BWD1 397 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 ANKRD2Q9GZV1 360 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 CHMP4BQ9H444 224 aaKnown RBP3.94□□□□□ -1.78
ITGB1-208ENST00000464001 PLEKHA4Q9H4M7 779 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 UPF2Q9HAU5 1272 aaKnown RBP3.94□□□□□ -1.78
ITGB1-208ENST00000464001 PCDHB16Q9NRJ7 776 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 CORO1CQ9ULV4 474 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-208ENST00000464001 A4GNTQ9UNA3 340 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 UTYO14607 1347 aa3.94□□□□□ -1.78
ITGB1-208ENST00000464001 ATAD2BQ9ULI0 1458 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 TEX13CA0A0J9YWL9 993 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 A0A1W2PQ09 198 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 BLOC1S5-TXNDC5H3BN57 136 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 ZNHIT1O43257 154 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 TGFB1I1O43294 461 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 PCP11498 1178 aaKnown RBP3.93□□□□□ -1.78
ITGB1-208ENST00000464001 COX7A2P14406 83 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 PSMA4P25789 261 aaKnown RBP3.93□□□□□ -1.78
ITGB1-208ENST00000464001 PEX19P40855 299 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 EFNA5P52803 228 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 LIMK1P53667 647 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 TPD52P55327 224 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-208ENST00000464001 YBEYP58557 167 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-208ENST00000464001 CSNK2A1P68400 391 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-208ENST00000464001 NFE2L1Q14494 772 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 SLMAPQ14BN4 828 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 PRICKLE4Q2TBC4 344 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 ODF2Q5BJF6 829 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 SFMBT2Q5VUG0 894 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 GARNL3Q5VVW2 1013 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 NAA35Q5VZE5 725 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 SLC46A3Q7Z3Q1 461 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 KRTAP7-1Q8IUC3 87 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 THNSL1Q8IYQ7 743 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 TMCO5AQ8N6Q1 288 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 PCDH20Q8N6Y1 951 aaKnown RBP3.93□□□□□ -1.78
ITGB1-208ENST00000464001 CSNK2A3Q8NEV1 391 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 TAF4BQ92750 862 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 PTP4A1Q93096 173 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 VPS33AQ96AX1 596 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 PERPQ96FX8 193 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 CABS1Q96KC9 395 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 IFIH1Q9BYX4 1025 aaKnown RBP3.93□□□□□ -1.78
ITGB1-208ENST00000464001 TTYH1Q9H313 450 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-208ENST00000464001 MUC13Q9H3R2 512 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 OPA3Q9H6K4 179 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 ERVMER34-1Q9H9K5 563 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 TAS2R10Q9NYW0 307 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 MORF4L1Q9UBU8 362 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 LYVE1Q9Y5Y7 322 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 SMCHD1A6NHR9 2005 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 PTPRCP08575 1304 aa3.93□□□□□ -1.78
ITGB1-208ENST00000464001 IGLV5-45A0A087WSX0 123 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 IGKV3D-20A0A0C4DH25 116 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 NPIPB15A6NHN6 443 aaPredicted RBP3.92□□□□□ -1.78
ITGB1-208ENST00000464001 CCDC69A6NI79 296 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 A8MXE2 369 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 PLOD2O00469 737 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 SYNGR3O43761 229 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 ENTPD3O75355 529 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 CAVIN2O95810 425 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 IGHV4-39P01824 125 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 HOXB5P09067 269 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 RARGP13631 454 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 POLR2CP19387 275 aaPredicted RBP3.92□□□□□ -1.78
ITGB1-208ENST00000464001 NFKBIAP25963 317 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 FASLGP48023 281 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 UFM1P61960 85 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 TRIM29Q14134 588 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 ZNF805Q5CZA5 627 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 FRG2Q64ET8 278 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 SIGIRRQ6IA17 410 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 BRAT1Q6PJG6 821 aa3.92□□□□□ -1.78
ITGB1-208ENST00000464001 ADGRA1Q86SQ6 560 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms