RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 DR1Q01658 176 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 PLOD1Q02809 727 aaPredicted RBP11.84□□□□□ -0.51
HPS1-206ENST00000462743 EIF3IQ13347 325 aaKnown RBP11.84□□□□□ -0.51
HPS1-206ENST00000462743 BIRC2Q13490 618 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 TRA2AQ13595 282 aaKnown RBP eCLIP11.84□□□□□ -0.51
HPS1-206ENST00000462743 MORF4L2Q15014 288 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 RPE65Q16518 533 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 KCTD19Q17RG1 926 aaPredicted RBP11.84□□□□□ -0.51
HPS1-206ENST00000462743 PLA2G4EQ3MJ16 856 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 ANKRD20A4Q4UJ75 823 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 TMEM71Q6P5X7 295 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 WDR74Q6RFH5 385 aaPredicted RBP11.84□□□□□ -0.51
HPS1-206ENST00000462743 ZNF574Q6ZN55 896 aaPredicted RBP11.84□□□□□ -0.51
HPS1-206ENST00000462743 MICALCLQ6ZW33 695 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 DET1Q7L5Y6 550 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 PIM3Q86V86 326 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 SLITRK4Q8IW52 837 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 KLHL7Q8IXQ5 586 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 CFAP206Q8IYR0 622 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 LSMEM2Q8N112 164 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 CLDN19Q8N6F1 224 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 TMEM159Q96B96 161 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 MFSD3Q96ES6 412 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 FCRL3Q96P31 734 aaPredicted RBP11.84□□□□□ -0.51
HPS1-206ENST00000462743 CATSPERZQ9NTU4 200 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 KCNK4Q9NYG8 393 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 WDR37Q9Y2I8 494 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 PCDHGA8Q9Y5G5 932 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 PRSS21Q9Y6M0 314 aa11.84□□□□□ -0.51
HPS1-206ENST00000462743 CACNA1BQ00975 2339 aa11.83□□□□□ -0.51
HPS1-206ENST00000462743 AKAP13Q12802 2813 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 CCDC187A0A096LP49 1063 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 ZCWPW2A0A1B0GU75 182 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 FAM187AA6NFU0 413 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 PRMT5O14744 637 aaPredicted RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 NDC80O14777 642 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 LIN7AO14910 233 aaPredicted RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 TTI1O43156 1089 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 USP1O94782 785 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 VAPBO95292 243 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 OR56A5P0C7T3 313 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 PAMP19021 973 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 RPS3P23396 243 aaKnown RBP eCLIP11.83□□□□□ -0.52
HPS1-206ENST00000462743 LIMK2P53671 638 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 DRG2P55039 364 aaKnown RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 INHBCP55103 352 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 ADARP55265 1226 aaKnown RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 CFHR1Q03591 330 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 SEMA3AQ14563 771 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 HIBCHQ6NVY1 386 aaPredicted RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 USP53Q70EK8 1073 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 TMPRSS9Q7Z410 1059 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 MAATS1Q7Z4T9 603 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 SDCCAG8Q86SQ7 713 aaPredicted RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 LRRC6Q86X45 466 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 LMNTD2Q8IXW0 634 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 AGGF1Q8N302 714 aaeCLIP11.83□□□□□ -0.52
HPS1-206ENST00000462743 OR4D9Q8NGE8 314 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 WDR36Q8NI36 951 aaKnown RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 NXPE2Q96DL1 559 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 PRR11Q96HE9 360 aaPredicted RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 INSM2Q96T92 566 aaPredicted RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 NAT9Q9BTE0 207 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 B3GNT4Q9C0J1 378 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 RAB33BQ9H082 229 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 OR52A5Q9H2C5 316 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 CCDC86Q9H6F5 360 aaKnown RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 COG4Q9H9E3 785 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 POLR1BQ9H9Y6 1135 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 MARCH4Q9P2E8 410 aaPredicted RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 EPHA6Q9UF33 1036 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 CDC23Q9UJX2 597 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 ATXN7L1Q9ULK2 861 aaPredicted RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 PCDHB1Q9Y5F3 818 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 FAM169AQ9Y6X4 670 aa11.83□□□□□ -0.52
HPS1-206ENST00000462743 ANKRD11Q6UB99 2663 aaPredicted RBP11.83□□□□□ -0.52
HPS1-206ENST00000462743 A0A1W2PNU3 283 aaPredicted RBP11.82□□□□□ -0.52
HPS1-206ENST00000462743 SLC5A10A0PJK1 596 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 GOLGA8MH3BSY2 632 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 KIF2AO00139 706 aaPredicted RBP11.82□□□□□ -0.52
HPS1-206ENST00000462743 HGSO14964 777 aaPredicted RBP11.82□□□□□ -0.52
HPS1-206ENST00000462743 TP73O15350 636 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 OR1I1O60431 355 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 FTH1P02794 183 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 MTHFD1P11586 935 aaKnown RBP11.82□□□□□ -0.52
HPS1-206ENST00000462743 OGNP20774 298 aaKnown RBP11.82□□□□□ -0.52
HPS1-206ENST00000462743 NDUFS1P28331 727 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 TERF1P54274 439 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 CYP4F3Q08477 520 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 TUBB2AQ13885 445 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 TYSND1Q2T9J0 566 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 IZUMO3Q5VZ72 239 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 MRNIPQ6NTE8 343 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 NEPROQ6NW34 567 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 ZNF449Q6P9G9 518 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 CES3Q6UWW8 571 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 B3GNT8Q7Z7M8 397 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 TRIM48Q8IWZ4 208 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 OR10G6Q8NH81 332 aa11.82□□□□□ -0.52
HPS1-206ENST00000462743 NAT14Q8WUY8 206 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms