RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 MGAT4DA6NG13 374 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 ERI2A8K979 691 aaKnown RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 H7C0S8 307 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 CAPN5O15484 640 aaPredicted RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 PSMD3O43242 534 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 SGTAO43765 313 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 NRDCO43847 1150 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 RASSF9O75901 435 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 SLC35G4P0C7Q5 338 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 MTHFD1P11586 935 aaKnown RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 TPH1P17752 444 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 ACRV1P26436 265 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 LEPRP48357 1165 aaKnown RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 LMAN1P49257 510 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 CCZ1BP86790 482 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 CCZ1P86791 482 aaPredicted RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 RPE65Q16518 533 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 GPR33Q49SQ1 333 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 TAF1BQ53T94 588 aaPredicted RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 ZRANB3Q5FWF4 1079 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 IRGCQ6NXR0 463 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 DUS1LQ6P1R4 473 aaKnown RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 PCSK4Q6UW60 755 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 CEACAM20Q6UY09 585 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 ZNF662Q6ZS27 426 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 MICALCLQ6ZW33 695 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 LINC00523Q86TU6 105 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 LRRC8AQ8IWT6 810 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 LSM14AQ8ND56 463 aaKnown RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 OR2L2Q8NH16 312 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 HM13Q8TCT9 377 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 HEXDCQ8WVB3 486 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 JPH3Q8WXH2 748 aaPredicted RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 SLC39A7Q92504 469 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 LINC00615Q96LM1 132 aaPredicted RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 C9orf72Q96LT7 481 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 C12orf66Q96MD2 445 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 CTRCQ99895 268 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 WWP1Q9H0M0 922 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 FAM96AQ9H5X1 160 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 NLE1Q9NVX2 485 aaPredicted RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 SIDT1Q9NXL6 827 aaKnown RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 ZDHHC3Q9NYG2 299 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 ZNF148Q9UQR1 794 aa9.96□□□□□ -0.82
SF3A3-204ENST00000462258 CFAP20Q9Y6A4 193 aaKnown RBP9.96□□□□□ -0.82
SF3A3-204ENST00000462258 IGLV3-16A0A075B6K0 115 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 TRBV5-4A0A0C4DH59 114 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 CCDC78A2IDD5 438 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 E7EVH7 732 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 TK2O00142 265 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 TOX3O15405 576 aaPredicted RBP9.95□□□□□ -0.82
SF3A3-204ENST00000462258 EFSO43281 561 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 RAD1O60671 282 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 PRB1P04280 392 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 PRSS56P0CW18 603 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 ATP1B2P14415 290 aaPredicted RBP9.95□□□□□ -0.82
SF3A3-204ENST00000462258 MSNP26038 577 aaKnown RBP9.95□□□□□ -0.82
SF3A3-204ENST00000462258 STIP1P31948 543 aaKnown RBP9.95□□□□□ -0.82
SF3A3-204ENST00000462258 FDFT1P37268 417 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 SEPHS1P49903 392 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 MC2RQ01718 297 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 CDH17Q12864 832 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 SEMA5AQ13591 1074 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 SNX1Q13596 522 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 SIX1Q15475 284 aaPredicted RBP9.95□□□□□ -0.82
SF3A3-204ENST00000462258 CCDC38Q502W7 563 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 METRNLQ641Q3 311 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 XKR5Q6UX68 686 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 PPP1R21Q6ZMI0 780 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 FAM92BQ6ZTR7 304 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 PRSS42Q7Z5A4 293 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 SERPINA9Q86WD7 417 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 IL22RA1Q8N6P7 574 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 CCDC89Q8N998 374 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 DNAAF3Q8N9W5 541 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 TRIM58Q8NG06 486 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 OR52K1Q8NGK4 314 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 STYXQ8WUJ0 223 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 TTC9Q92623 222 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 RMDN2Q96LZ7 410 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 ZPBPQ9BS86 351 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 ZNF768Q9H5H4 540 aaKnown RBP9.95□□□□□ -0.82
SF3A3-204ENST00000462258 VPS37BQ9H9H4 285 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 ETNK1Q9HBU6 452 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 APMAPQ9HDC9 416 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 PAK5Q9P286 719 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 ACSL5Q9ULC5 683 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 PCDHGA4Q9Y5G9 962 aa9.95□□□□□ -0.82
SF3A3-204ENST00000462258 HEATR9A2RTY3 570 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 POLR1CO15160 346 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-204ENST00000462258 C1QL1O75973 258 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 SUN1O94901 812 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 GAS8O95995 478 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 ETS1P14921 441 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 WT1P19544 449 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-204ENST00000462258 CDKN1CP49918 316 aaPredicted RBP9.94□□□□□ -0.82
SF3A3-204ENST00000462258 PPP1CAP62136 330 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 CACNG1Q06432 222 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 FOXM1Q08050 763 aa9.94□□□□□ -0.82
SF3A3-204ENST00000462258 COL9A2Q14055 689 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms