RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 SGTAO43765 313 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 SRP72O76094 671 aaKnown RBP8.97□□□□□ -0.97
BRCA1-207ENST00000461798 STK17BO94768 372 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 CRTAMO95727 393 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 DLGAP3O95886 979 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 LIFP15018 202 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 PSMA3P25788 255 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 PSMB4P28070 264 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 CAPZBP47756 277 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 LEPRP48357 1165 aaKnown RBP8.97□□□□□ -0.97
BRCA1-207ENST00000461798 PPM1FP49593 454 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-207ENST00000461798 NAP1L1P55209 391 aaKnown RBP8.97□□□□□ -0.97
BRCA1-207ENST00000461798 GFERP55789 205 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 ABHD18Q0P651 414 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 KLF1Q13351 362 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-207ENST00000461798 SEPT7Q16181 437 aaKnown RBP8.97□□□□□ -0.97
BRCA1-207ENST00000461798 PARP6Q2NL67 630 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 BCL7AQ4VC05 210 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 KCTD11Q693B1 232 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 AADACL2Q6P093 401 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 FAM83HQ6ZRV2 1179 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-207ENST00000461798 GAS2L3Q86XJ1 694 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 SYCE1Q8N0S2 351 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 TXLNBQ8N3L3 684 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 ACRBPQ8NEB7 543 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 OR4K2Q8NGD2 314 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 OR2L2Q8NH16 312 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 CCDC110Q8TBZ0 833 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 HEXDCQ8WVB3 486 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 JPH3Q8WXH2 748 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-207ENST00000461798 RSC1A1Q92681 617 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 CXorf40BQ96DE9 158 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 CTRCQ99895 268 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 BAG1Q99933 345 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-207ENST00000461798 ASB8Q9H765 288 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 APMAPQ9HDC9 416 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 STARD5Q9NSY2 213 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 WDR70Q9NW82 654 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 GEMIN8Q9NWZ8 242 aaKnown RBP8.97□□□□□ -0.97
BRCA1-207ENST00000461798 KLHL3Q9UH77 587 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 AMFRQ9UKV5 643 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 KCTD3Q9Y597 815 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 ARL5AQ9Y689 179 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 SDK2Q58EX2 2172 aa8.97□□□□□ -0.97
BRCA1-207ENST00000461798 ATMQ13315 3056 aa8.96□□□□□ -0.97
BRCA1-207ENST00000461798 LOC101059948A0A1B0GTJ6 334 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 C17orf113A0A1B0GUU1 675 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 GOLGA6L9A6NEM1 432 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 OR2AG2A6NM03 316 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 ZNF891A8MT65 544 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-207ENST00000461798 H7C0S8 307 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 J3QKU1 62 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 DDX3YO15523 660 aaKnown RBP8.96□□□□□ -0.98
BRCA1-207ENST00000461798 GPR39O43194 453 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 LDB2O43679 373 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 KIF1CO43896 1103 aaKnown RBP8.96□□□□□ -0.98
BRCA1-207ENST00000461798 PRAMEF1O95521 474 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 FGF5P12034 268 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 NELFEP18615 380 aaKnown RBP8.96□□□□□ -0.98
BRCA1-207ENST00000461798 MSH3P20585 1137 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 HADHAP40939 763 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 ZNF140P52738 457 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-207ENST00000461798 CYP4F2P78329 520 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 KIF5AQ12840 1032 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 OLIG2Q13516 323 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 NFE2L1Q14494 772 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 GPR33Q49SQ1 333 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.96□□□□□ -0.98
BRCA1-207ENST00000461798 FNBP1LQ5T0N5 605 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 CACHD1Q5VU97 1274 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 CAPRIN2Q6IMN6 1127 aaKnown RBP8.96□□□□□ -0.98
BRCA1-207ENST00000461798 KLHL35Q6PF15 583 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 PEX26Q7Z412 305 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 SNX20Q7Z614 316 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 BPHLQ86WA6 291 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-207ENST00000461798 ESX1Q8N693 406 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 UBL4BQ8N7F7 174 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 SLC35B2Q8TB61 432 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 UBXN4Q92575 508 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 ULK4Q96C45 1275 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 LRRC45Q96CN5 670 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 SLC41A2Q96JW4 573 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 CATSPER2Q96P56 530 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 TGM7Q96PF1 710 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 FCRL4Q96PJ5 515 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 INSM2Q96T92 566 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-207ENST00000461798 CD180Q99467 661 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 TBL1YQ9BQ87 522 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 APOL2Q9BQE5 337 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 ARHGAP9Q9BRR9 750 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 ADNPQ9H2P0 1102 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 GPN2Q9H9Y4 310 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-207ENST00000461798 IMPACTQ9P2X3 320 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 TRIM10Q9UDY6 481 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 FKBPLQ9UIM3 349 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 SPTA1P02549 2419 aa8.96□□□□□ -0.98
BRCA1-207ENST00000461798 TLN1Q9Y490 2541 aaKnown RBP8.95□□□□□ -0.98
BRCA1-207ENST00000461798 IGLV3-16A0A075B6K0 115 aa8.95□□□□□ -0.98
BRCA1-207ENST00000461798 TRBV5-4A0A0C4DH59 114 aa8.95□□□□□ -0.98
BRCA1-207ENST00000461798 MACROD2A1Z1Q3 448 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms