RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 HMGB4Q8WW32 186 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 UBXN10Q96LJ8 280 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 SERPINI1Q99574 410 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 CCM2Q9BSQ5 444 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 WDR55Q9H6Y2 383 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 HEBP1Q9NRV9 189 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ZNHIT2Q9UHR6 403 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 PPM1HQ9ULR3 514 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ASF1AQ9Y294 204 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 IGLON5A6NGN9 336 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 H0Y858 1186 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 STX16-NPEPL1H3BU86 382 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 EIF3FO00303 357 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 STX16O14662 325 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 AIM2O14862 343 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ANGPT2O15123 496 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 SNNO75324 88 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 GMNNO75496 209 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 POP7O75817 140 aaKnown RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 WDR47O94967 919 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 UNC5CO95185 931 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 LBPP18428 481 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 CASP2P42575 452 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 MAGEA9P43362 315 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 AP1S2P56377 157 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 RPS21P63220 83 aaKnown RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 IRF8Q02556 426 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 MLLT1Q03111 559 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 PTSQ03393 145 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ACTN3Q08043 901 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 TMEM115Q12893 351 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 DLG1Q12959 904 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 CAMK2GQ13555 558 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 TGFBIQ15582 683 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 OR4D1Q15615 310 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 PLA2G4EQ3MJ16 856 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 CTSL3PQ5NE16 218 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 PLEKHS1Q5SXH7 462 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ARTNQ5T4W7 220 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 VWA5B1Q5TIE3 1220 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 FRMD7Q6ZUT3 714 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ZNF765Q7L2R6 523 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 RD3Q7Z3Z2 195 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 AMZ2Q86W34 360 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 HEATR4Q86WZ0 1026 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 PHACTR4Q8IZ21 702 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 FAM3CQ92520 227 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 HLA-CQ95604 372 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ESAMQ96AP7 390 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 PTERQ96BW5 349 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 RPP25Q9BUL9 199 aaKnown RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 CCDC28BQ9BUN5 200 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 MRPL1Q9BYD6 325 aaKnown RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 PLA2G2FQ9BZM2 168 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ZMYND15Q9H091 742 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 PARVBQ9HBI1 364 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 CLEC1BQ9P126 229 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 KLHL42Q9P2K6 505 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 KLQ9UEF7 1012 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 BTRCQ9Y297 605 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 MTCH2Q9Y6C9 303 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ATP6AP2A0A1C7CYW4 349 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 A0A1W2PQU0 124 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 LIN7AO14910 233 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ATP6AP2O75787 350 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 PAK4O96013 591 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ASGR2P07307 311 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 FCARP24071 287 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 P2RY2P41231 377 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 IDH3AP50213 366 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 VASPP50552 380 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 MRPS21P82921 87 aaKnown RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 STX5Q13190 355 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 LRRC32Q14392 662 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 HIST2H2ACQ16777 129 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 GALNTL6Q49A17 601 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ATP6AP1LQ52LC2 224 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 AGKQ53H12 422 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ZNF678Q5SXM1 525 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 NAIF1Q69YI7 327 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 CLEC6AQ6EIG7 209 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 HIST2H2AA3Q6FI13 130 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 ADCK2Q7Z695 626 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 KIAA0907Q7Z7F0 614 aaPredicted RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 LRRTM4Q86VH4 590 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 LONP2Q86WA8 852 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 GALNT13Q8IUC8 556 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 TRIM48Q8IWZ4 208 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 PCYOX1LQ8NBM8 494 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 SMRP1Q8NCR6 262 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 DDHD1Q8NEL9 900 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 TSTD1Q8NFU3 115 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 HM13Q8TCT9 377 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 DNASE1L2Q92874 299 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 FUBP1Q96AE4 644 aaKnown RBP4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 C19orf60Q96EN9 201 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 MSANTD3Q96H12 275 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 SHDQ96IW2 340 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 HIC2Q96JB3 615 aa4.05□□□□□ -1.76
ATP13A3-206ENST00000461660 LMLNQ96KR4 655 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms