RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 SCN8AQ9UQD0 1980 aa7.35□□□□□ -1.23
LSG1-205ENST00000461343 CFAP73A6NFT4 308 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 ERICH4A6NGS2 130 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 LOC730098B7Z3J9 87 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 H3BM21 787 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 IFRD1O00458 451 aaPredicted RBP7.34□□□□□ -1.23
LSG1-205ENST00000461343 KMOO15229 486 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 FFAR2O15552 330 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 MMP20O60882 483 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 SUPT7LO94864 414 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 EGFP01133 1207 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 SERPINA6P08185 405 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 FGF4P08620 206 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 MYCLP1P12525 358 aaPredicted RBP7.34□□□□□ -1.23
LSG1-205ENST00000461343 AKT2P31751 481 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 DRD3P35462 400 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 CCR5P51681 352 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 COPAP53621 1224 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 AQP5P55064 265 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 YPEL5P62699 121 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 IFT88Q13099 833 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 CCINQ13939 588 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 LRP8Q14114 963 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 ZNF460Q14592 562 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 KRT72Q14CN4 511 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 PCBP2Q15366 365 aaKnown RBP eCLIP7.34□□□□□ -1.23
LSG1-205ENST00000461343 MAPRE2Q15555 327 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 TGFBIQ15582 683 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 TSNQ15631 228 aaKnown RBP7.34□□□□□ -1.23
LSG1-205ENST00000461343 PFKFB4Q16877 469 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 ARL13AQ5H913 290 aaPredicted RBP7.34□□□□□ -1.23
LSG1-205ENST00000461343 ZNF678Q5SXM1 525 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 UNC5DQ6UXZ4 953 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 LRRC70Q7Z2Q7 622 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 PIM3Q86V86 326 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 LRRTM4Q86VH4 590 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 DCP2Q8IU60 420 aaKnown RBP7.34□□□□□ -1.23
LSG1-205ENST00000461343 TRAPPC5Q8IUR0 188 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 CLYBLQ8N0X4 340 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 ZNF366Q8N895 744 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 PTGR2Q8N8N7 351 aaPredicted RBP7.34□□□□□ -1.23
LSG1-205ENST00000461343 OR14C36Q8NHC7 312 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 UBTD2Q8WUN7 234 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 EEF1AKMT1Q8WVE0 214 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 C10orf82Q8WW14 230 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 SCAMP4Q969E2 229 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 VOPP1Q96AW1 172 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 CMTM5Q96DZ9 223 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 CCDC138Q96M89 665 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 RAB3IPQ96QF0 476 aaPredicted RBP7.34□□□□□ -1.23
LSG1-205ENST00000461343 EGFL8Q99944 293 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 TIMM29Q9BSF4 260 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 RPP25Q9BUL9 199 aaKnown RBP7.34□□□□□ -1.23
LSG1-205ENST00000461343 MECRQ9BV79 373 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 GATA5Q9BWX5 397 aaPredicted RBP7.34□□□□□ -1.23
LSG1-205ENST00000461343 RAB11FIP5Q9BXF6 653 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 SLCO1B3Q9NPD5 702 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 ITM2CQ9NQX7 267 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 ARHGEF3Q9NR81 526 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 RIC8BQ9NVN3 520 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.34□□□□□ -1.23
LSG1-205ENST00000461343 ARL15Q9NXU5 204 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 WWOXQ9NZC7 414 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 OPTCQ9UBM4 332 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 CDH22Q9UJ99 828 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 ZFP69BQ9UJL9 534 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 HEBP2Q9Y5Z4 205 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 TICRRQ7Z2Z1 1910 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 PLXNA2O75051 1894 aa7.34□□□□□ -1.23
LSG1-205ENST00000461343 COL4A3Q01955 1670 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 TBC1D3DA0A087WVF3 549 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 TBC1D3IA0A087WXS9 549 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 TBC1D3EA0A087X179 549 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 TBC1D3KA0A087X1G2 549 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 A0A1W2PP55 124 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 NPEPPSL1A6NEC2 478 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 TBC1D3FA6NER0 549 aaPredicted RBP7.33□□□□□ -1.24
LSG1-205ENST00000461343 MGAT4DA6NG13 374 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 TBC1D3LB9A6J9 549 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 MATN2O00339 956 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 FPGTO14772 594 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 UGDHO60701 494 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 SLC34A2O95436 690 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 ESRRBO95718 433 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 TSPAN12O95859 305 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 IGLV3-19P01714 112 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 RPS17P08708 135 aaKnown RBP7.33□□□□□ -1.24
LSG1-205ENST00000461343 TBC1D3HP0C7X1 549 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 UROSP10746 265 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 EPB42P16452 691 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 NDUFS1P28331 727 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 PRDX6P30041 224 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 TRIM23P36406 574 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 SOX9P48436 509 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 RPIAP49247 311 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 CDKN1CP49918 316 aaPredicted RBP7.33□□□□□ -1.24
LSG1-205ENST00000461343 ADPRHP54922 357 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 KIAA1024LP59773 190 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 STX1BP61266 288 aa7.33□□□□□ -1.24
LSG1-205ENST00000461343 HSPA14Q0VDF9 509 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms