RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 ULK4Q96C45 1275 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 PBKQ96KB5 322 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 DNAJC1Q96KC8 554 aaKnown RBP18.06■□□□□ 0.48
COL9A2-205ENST00000461118 SLC38A3Q99624 504 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.06■□□□□ 0.48
COL9A2-205ENST00000461118 OSGEPL1Q9H4B0 414 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 UCK1Q9HA47 277 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 RDH14Q9HBH5 336 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 GEMIN8Q9NWZ8 242 aaKnown RBP18.06■□□□□ 0.48
COL9A2-205ENST00000461118 SCHIP1Q9P0W5 487 aaPredicted RBP18.06■□□□□ 0.48
COL9A2-205ENST00000461118 CPNE7Q9UBL6 633 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 TTC7AQ9ULT0 858 aaPredicted RBP18.06■□□□□ 0.48
COL9A2-205ENST00000461118 TRBV5-4A0A0C4DH59 114 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 KLHL33A6NCF5 533 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 E7EVH7 732 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 POP7O75817 140 aaKnown RBP18.05■□□□□ 0.48
COL9A2-205ENST00000461118 BRAFP15056 766 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 MSH3P20585 1137 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 ITGALP20701 1170 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 CD82P27701 267 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 AKT1P31749 480 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 EPHA4P54764 986 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 TMPRSS15P98073 1019 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 MAP9Q49MG5 647 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 NXPE1Q8N323 547 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 PRELID2Q8N945 189 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 DNAAF3Q8N9W5 541 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 OR4D9Q8NGE8 314 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 HEXDCQ8WVB3 486 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 CDKN2AIPNLQ96HQ2 116 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 NUDT22Q9BRQ3 303 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 SLC25A18Q9H1K4 315 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 ZNF624Q9P2J8 865 aaPredicted RBP18.05■□□□□ 0.48
COL9A2-205ENST00000461118 PDP2Q9P2J9 529 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 RIMKLBQ9ULI2 386 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 DNAJC16Q9Y2G8 782 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 SLC30A1Q9Y6M5 507 aa18.05■□□□□ 0.48
COL9A2-205ENST00000461118 LRRK2Q5S007 2527 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 OR2AG2A6NM03 316 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 GAS8O95995 478 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 ZSCAN5DPP0CG00 497 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 MC4RP32245 332 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 SLC19A1P41440 591 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 LIMK2P53671 638 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 TLE1Q04724 770 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 TRA2AQ13595 282 aaKnown RBP eCLIP18.04■□□□□ 0.48
COL9A2-205ENST00000461118 LAMB3Q13751 1172 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 SKIDA1Q1XH10 827 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 BCL7AQ4VC05 210 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 PHF19Q5T6S3 580 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 NKAIN2Q5VXU1 208 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 TMEM71Q6P5X7 295 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 OR10G6Q8NH81 332 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 NKD1Q969G9 470 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 LINC00615Q96LM1 132 aaPredicted RBP18.04■□□□□ 0.48
COL9A2-205ENST00000461118 RANBP9Q96S59 729 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 EPB41L1Q9H4G0 881 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 CASS4Q9NQ75 786 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 EIF2B3Q9NR50 452 aaKnown RBP18.04■□□□□ 0.48
COL9A2-205ENST00000461118 PIH1D1Q9NWS0 290 aaKnown RBP18.04■□□□□ 0.48
COL9A2-205ENST00000461118 CRLS1Q9UJA2 301 aa18.04■□□□□ 0.48
COL9A2-205ENST00000461118 IGLV3-16A0A075B6K0 115 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 IGHV5-10-1A0A0J9YXX1 117 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 LILRA5A6NI73 299 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 PDZK1P1A8MUH7 402 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 CCL22O00626 93 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 HGSO14964 777 aaPredicted RBP18.03■□□□□ 0.48
COL9A2-205ENST00000461118 SGTAO43765 313 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 APRTP07741 180 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 RALBP11234 206 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 RPL10P27635 214 aaKnown RBP18.03■□□□□ 0.48
COL9A2-205ENST00000461118 GRIA1P42261 906 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 KCNJ1P48048 391 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 LMAN1P49257 510 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 SEPT6Q14141 434 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 FNBP1LQ5T0N5 605 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 METRNLQ641Q3 311 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 WDR74Q6RFH5 385 aaPredicted RBP18.03■□□□□ 0.48
COL9A2-205ENST00000461118 PPP1R21Q6ZMI0 780 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 GSTA5Q7RTV2 222 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 ZNF761Q86XN6 746 aaPredicted RBP18.03■□□□□ 0.48
COL9A2-205ENST00000461118 RBM12BQ8IXT5 1001 aaKnown RBP18.03■□□□□ 0.48
COL9A2-205ENST00000461118 ZSCAN1Q8NBB4 408 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 RCBTB1Q8NDN9 531 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 JPH3Q8WXH2 748 aaPredicted RBP18.03■□□□□ 0.48
COL9A2-205ENST00000461118 AHCYL2Q96HN2 611 aaKnown RBP18.03■□□□□ 0.48
COL9A2-205ENST00000461118 COPS8Q99627 209 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 POT1Q9NUX5 634 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 ZDHHC3Q9NYG2 299 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 PCDHB11Q9Y5F2 797 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 NBASA2RRP1 2371 aa18.03■□□□□ 0.48
COL9A2-205ENST00000461118 SPENQ96T58 3664 aaKnown RBP18.03■□□□□ 0.48
COL9A2-205ENST00000461118 HEATR9A2RTY3 570 aa18.02■□□□□ 0.48
COL9A2-205ENST00000461118 MGAT4DA6NG13 374 aa18.02■□□□□ 0.48
COL9A2-205ENST00000461118 CFAP99D6REC4 459 aa18.02■□□□□ 0.48
COL9A2-205ENST00000461118 DUX1O43812 170 aa18.02■□□□□ 0.48
COL9A2-205ENST00000461118 VIPP01282 170 aa18.02■□□□□ 0.48
COL9A2-205ENST00000461118 FGF3P11487 239 aaPredicted RBP18.02■□□□□ 0.48
COL9A2-205ENST00000461118 ADRA1DP25100 572 aa18.02■□□□□ 0.48
COL9A2-205ENST00000461118 MSNP26038 577 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms