RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ITGA7Q13683 1181 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 MVPQ14764 893 aaKnown RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 DUSP6Q16828 381 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 ALS2CLQ60I27 953 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 FAM91A1Q658Y4 838 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 GALNT17Q6IS24 598 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 ZNF425Q6IV72 752 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 SLC18B1Q6NT16 456 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 DUS1LQ6P1R4 473 aaKnown RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 WDR73Q6P4I2 378 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 FIGLAQ6QHK4 219 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 MOXD1Q6UVY6 613 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 ZNF66Q6ZN08 573 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 C11orf57Q6ZUT1 292 aaPredicted RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 NLRP14Q86W24 1093 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 PALB2Q86YC2 1186 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 MAML2Q8IZL2 1156 aaPredicted RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 BEST3Q8N1M1 668 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 NHLRC2Q8NBF2 726 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 ENGASEQ8NFI3 743 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 SPATA20Q8TB22 786 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 GRAPLQ8TC17 118 aaPredicted RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 BICD2Q8TD16 824 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 ADAMTS14Q8WXS8 1223 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 TAF4BQ92750 862 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 ORAI1Q96D31 301 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 PDLIM5Q96HC4 596 aaKnown RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 RUNDC3BQ96NL0 473 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 TSGA13Q96PP4 275 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 GFI1Q99684 422 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 CLK4Q9HAZ1 481 aaKnown RBP2.91□□□□□ -1.94
HPS3-203ENST00000460822 IL1RAPL2Q9NP60 686 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 TMEM184CQ9NVA4 438 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 OR6C3Q9NZP0 311 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 BLOC1S6Q9UL45 172 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 CDC14AQ9UNH5 594 aa2.91□□□□□ -1.94
HPS3-203ENST00000460822 POLR1AO95602 1720 aaPredicted RBP2.9□□□□□ -1.95
HPS3-203ENST00000460822 ZNF541Q9H0D2 1346 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 SETD5Q9C0A6 1442 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 A0A087WV48 116 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 KRT87PA6NCN2 255 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 J3KR12 359 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 J3QR06 171 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 IFIT3O14879 490 aaKnown RBP2.9□□□□□ -1.95
HPS3-203ENST00000460822 PGRMC2O15173 223 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 ASAP2O43150 1006 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 ZNF217O75362 1048 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 SEC22BO75396 215 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 GCNT3O95395 438 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 HMOX1P09601 288 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 ITGB6P18564 788 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 HRH2P25021 359 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 MAPK3P27361 379 aaPredicted RBP2.9□□□□□ -1.95
HPS3-203ENST00000460822 TNFRSF8P28908 595 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 HNRNPH1P31943 449 aaKnown RBP2.9□□□□□ -1.95
HPS3-203ENST00000460822 APOBEC1P41238 236 aaKnown RBP2.9□□□□□ -1.95
HPS3-203ENST00000460822 ME1P48163 572 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 SLC12A3P55017 1021 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 P2RX3P56373 397 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 POLR2FP61218 127 aaKnown RBP2.9□□□□□ -1.95
HPS3-203ENST00000460822 CSNK2A1P68400 391 aaPredicted RBP2.9□□□□□ -1.95
HPS3-203ENST00000460822 ID2Q02363 134 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 FOXM1Q08050 763 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 CBX3Q13185 183 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 EFNB3Q15768 340 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 TAZQ16635 292 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 ZNF284Q2VY69 593 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 CEP78Q5JTW2 689 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 PXDC1Q5TGL8 231 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 SFMBT2Q5VUG0 894 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 MORN5Q5VZ52 161 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 FRG2Q64ET8 278 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 TPRG1Q6ZUI0 275 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 DET1Q7L5Y6 550 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 C1QL2Q7Z5L3 287 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 FAM219AQ8IW50 185 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 MIGA1Q8NAN2 632 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 CSNK2A3Q8NEV1 391 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 PRSS3P2Q8NHM4 247 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 TMEM174Q8WUU8 243 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 SPDL1Q96EA4 605 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 APOLD1Q96LR9 279 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 FCRL4Q96PJ5 515 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 SIGLEC11Q96RL6 698 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 SH3GL2Q99962 352 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 QTRT1Q9BXR0 403 aaKnown RBP2.9□□□□□ -1.95
HPS3-203ENST00000460822 CACNG6Q9BXT2 260 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 CNGB3Q9NQW8 809 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 CNIH4Q9P003 139 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 TINAGQ9UJW2 476 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 CDH7Q9ULB5 785 aa2.9□□□□□ -1.95
HPS3-203ENST00000460822 MAP3K1Q13233 1512 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 ANKUB1A6NFN9 424 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 MDM4O15151 490 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 SLC16A5O15375 505 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 ZBTB43O43298 467 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 TLX3O43711 291 aaPredicted RBP2.89□□□□□ -1.95
HPS3-203ENST00000460822 SSX4O60224 188 aa2.89□□□□□ -1.95
HPS3-203ENST00000460822 ZIC3O60481 467 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms