RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 GPR156Q8NFN8 814 aa22.07■■□□□ 1.12
C9orf3-209ENST00000460573 OR6C4Q8NGE1 309 aa22.07■■□□□ 1.12
C9orf3-209ENST00000460573 ZDHHC1Q8WTX9 485 aa22.07■■□□□ 1.12
C9orf3-209ENST00000460573 FMO2Q99518 471 aa22.07■■□□□ 1.12
C9orf3-209ENST00000460573 OSGEPL1Q9H4B0 414 aa22.07■■□□□ 1.12
C9orf3-209ENST00000460573 PLAC1Q9HBJ0 212 aa22.07■■□□□ 1.12
C9orf3-209ENST00000460573 WASH6PQ9NQA3 447 aa22.07■■□□□ 1.12
C9orf3-209ENST00000460573 IL1RAPL1Q9NZN1 696 aa22.07■■□□□ 1.12
C9orf3-209ENST00000460573 GNPTGQ9UJJ9 305 aa22.07■■□□□ 1.12
C9orf3-209ENST00000460573 ACSL5Q9ULC5 683 aa22.07■■□□□ 1.12
C9orf3-209ENST00000460573 PCDHB1Q9Y5F3 818 aa22.07■■□□□ 1.12
C9orf3-209ENST00000460573 PRSS21Q9Y6M0 314 aa22.07■■□□□ 1.12
C9orf3-209ENST00000460573 OR5K4A6NMS3 321 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 H3BMM5 538 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 S1PR4O95977 384 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 ERVK-10P10266 1014 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 DAB2P98082 770 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 NR0B2Q15466 257 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 ZNF449Q6P9G9 518 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 KIAA0408Q6ZU52 694 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 RELL1Q8IUW5 271 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 GALNT15Q8N3T1 639 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 EIF1ADQ8N9N8 165 aaKnown RBP22.06■■□□□ 1.12
C9orf3-209ENST00000460573 HM13Q8TCT9 377 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 LPGAT1Q92604 370 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 P2RY12Q9H244 342 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 PPANQ9NQ55 473 aaKnown RBP22.06■■□□□ 1.12
C9orf3-209ENST00000460573 IARS2Q9NSE4 1012 aaKnown RBP22.06■■□□□ 1.12
C9orf3-209ENST00000460573 MOCS1Q9NZB8 636 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 FBXO5Q9UKT4 447 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 DNAJC16Q9Y2G8 782 aa22.06■■□□□ 1.12
C9orf3-209ENST00000460573 CEP295Q9C0D2 2601 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 UBA6A0AVT1 1052 aaPredicted RBP22.05■■□□□ 1.12
C9orf3-209ENST00000460573 B4DGG1 531 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 SPAG6O75602 509 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 ESR1P03372 595 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 F3P13726 295 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 SLC1A2P43004 574 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 CARSP49589 748 aaKnown RBP22.05■■□□□ 1.12
C9orf3-209ENST00000460573 PLOD1Q02809 727 aaPredicted RBP22.05■■□□□ 1.12
C9orf3-209ENST00000460573 MGAT5Q09328 741 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 CTBP1Q13363 440 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 SMAD1Q15797 465 aaKnown RBP22.05■■□□□ 1.12
C9orf3-209ENST00000460573 AGAP9Q5VTM2 703 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 METRNLQ641Q3 311 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 GALNT7Q86SF2 657 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 C17orf82Q86X59 251 aaPredicted RBP22.05■■□□□ 1.12
C9orf3-209ENST00000460573 SLC35F3Q8IY50 421 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 UNC5BQ8IZJ1 945 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 C2CD4AQ8NCU7 369 aaPredicted RBP22.05■■□□□ 1.12
C9orf3-209ENST00000460573 PANX3Q96QZ0 392 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 SIRPGQ9P1W8 387 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 GULP1Q9UBP9 304 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 TBC1D29Q9UFV1 150 aa22.05■■□□□ 1.12
C9orf3-209ENST00000460573 KIR2DS5A0A0G2JLQ3 304 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 A0A0G2JNG1 304 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 A6NCN8 305 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 KIR2DS3K7RE56 304 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 NOBOXO60393 691 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 SNX2O60749 519 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 ACP1P24666 158 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 PBLDP30039 288 aaPredicted RBP22.04■■□□□ 1.12
C9orf3-209ENST00000460573 ECHS1P30084 290 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 LEPRP48357 1165 aaKnown RBP22.04■■□□□ 1.12
C9orf3-209ENST00000460573 KIR2DS5Q14953 304 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 C14orf28Q4W4Y0 310 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 PTRHD1Q6GMV3 140 aaKnown RBP22.04■■□□□ 1.12
C9orf3-209ENST00000460573 IYDQ6PHW0 289 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 ABRAXAS1Q6UWZ7 409 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 C3orf62Q6ZUJ4 267 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 DENND6AQ8IWF6 608 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 NAGSQ8N159 534 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 AVL9Q8NBF6 648 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 NAT14Q8WUY8 206 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 NAT6Q93015 286 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 TMEM121BQ9BXQ6 578 aaPredicted RBP22.04■■□□□ 1.12
C9orf3-209ENST00000460573 NSMCE4AQ9NXX6 385 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 PADI4Q9UM07 663 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 COMMD10Q9Y6G5 202 aa22.04■■□□□ 1.12
C9orf3-209ENST00000460573 ARID1BQ8NFD5 2236 aaPredicted RBP22.03■■□□□ 1.12
C9orf3-209ENST00000460573 LY6G6EA0A0G2JKS1 128 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 EME2A4GXA9 379 aaPredicted RBP22.03■■□□□ 1.12
C9orf3-209ENST00000460573 LIN7AO14910 233 aaPredicted RBP22.03■■□□□ 1.12
C9orf3-209ENST00000460573 KPNA5O15131 536 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 CDK4P11802 303 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 EIF3BP55884 814 aaKnown RBP22.03■■□□□ 1.12
C9orf3-209ENST00000460573 ILF2Q12905 390 aaKnown RBP22.03■■□□□ 1.12
C9orf3-209ENST00000460573 RPA4Q13156 261 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 ILKQ13418 452 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 NFE2L1Q14494 772 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 TEDDM1Q5T9Z0 273 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 CFAP206Q8IYR0 622 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 SFRP1Q8N474 314 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 KYQ8NBH2 561 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 CDKL2Q92772 493 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 C9orf72Q96LT7 481 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 BIRC8Q96P09 236 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 CCDC68Q9H2F9 335 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 PRDM8Q9NQV8 689 aa22.03■■□□□ 1.12
C9orf3-209ENST00000460573 ZFATQ9P243 1243 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms