RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 B4E171 279 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 ZSCAN12O43309 604 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 SGTAO43765 313 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 LIPCP11150 499 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 TYRP1P17643 537 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 TSPAN7P41732 249 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 PRLHRP49683 370 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 NLRP9Q7RTR0 991 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 FAM129CQ86XR2 697 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 CFAP206Q8IYR0 622 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 GLIS1Q8NBF1 620 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 RANBP9Q96S59 729 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 CCM2Q9BSQ5 444 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 VPS37BQ9H9H4 285 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 CASS4Q9NQ75 786 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 SLC39A1Q9NY26 324 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 RIMKLBQ9ULI2 386 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 PCDHB11Q9Y5F2 797 aa22.52■■□□□ 1.2
PTPN4-208ENST00000460289 MN1Q10571 1320 aaPredicted RBP22.52■■□□□ 1.2
PTPN4-208ENST00000460289 EFCAB7A8K855 629 aa22.51■■□□□ 1.19
PTPN4-208ENST00000460289 AP3B1O00203 1094 aa22.51■■□□□ 1.19
PTPN4-208ENST00000460289 TOX3O15405 576 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-208ENST00000460289 ZSCAN5DPP0CG00 497 aa22.51■■□□□ 1.19
PTPN4-208ENST00000460289 MSNP26038 577 aaKnown RBP22.51■■□□□ 1.19
PTPN4-208ENST00000460289 CDKN1CP49918 316 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-208ENST00000460289 RAB15P59190 212 aa22.51■■□□□ 1.19
PTPN4-208ENST00000460289 CCDC38Q502W7 563 aa22.51■■□□□ 1.19
PTPN4-208ENST00000460289 ZFPM2Q8WW38 1151 aa22.51■■□□□ 1.19
PTPN4-208ENST00000460289 ANP32BQ92688 251 aaKnown RBP22.51■■□□□ 1.19
PTPN4-208ENST00000460289 PBKQ96KB5 322 aa22.51■■□□□ 1.19
PTPN4-208ENST00000460289 DDA1Q9BW61 102 aa22.51■■□□□ 1.19
PTPN4-208ENST00000460289 EIF2B3Q9NR50 452 aaKnown RBP22.51■■□□□ 1.19
PTPN4-208ENST00000460289 OCIAD1Q9NX40 245 aa22.51■■□□□ 1.19
PTPN4-208ENST00000460289 OGFRQ9NZT2 677 aa22.51■■□□□ 1.19
PTPN4-208ENST00000460289 FOXJ2Q9P0K8 574 aa22.51■■□□□ 1.19
PTPN4-208ENST00000460289 KLHL3Q9UH77 587 aa22.51■■□□□ 1.19
PTPN4-208ENST00000460289 AP2A2O94973 939 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 C9P02748 559 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 SLC35G4P0C7Q5 338 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 MTHFD1P11586 935 aaKnown RBP22.5■■□□□ 1.19
PTPN4-208ENST00000460289 GRIA1P42261 906 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 CAPZBP47756 277 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 DCAF12Q5T6F0 453 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 KLHL35Q6PF15 583 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 HM13Q8TCT9 377 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 NAT14Q8WUY8 206 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 ART4Q93070 314 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.5■■□□□ 1.19
PTPN4-208ENST00000460289 ZDHHC12Q96GR4 267 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 C9orf72Q96LT7 481 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 CCNL2Q96S94 520 aaPredicted RBP22.5■■□□□ 1.19
PTPN4-208ENST00000460289 INSM2Q96T92 566 aaPredicted RBP22.5■■□□□ 1.19
PTPN4-208ENST00000460289 TTC1Q99614 292 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 WWP1Q9H0M0 922 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 IMP3Q9NV31 184 aaKnown RBP22.5■■□□□ 1.19
PTPN4-208ENST00000460289 FAM8A1Q9UBU6 413 aa22.5■■□□□ 1.19
PTPN4-208ENST00000460289 TEX51A0A1B0GUA7 166 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 CCDC78A2IDD5 438 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.49■■□□□ 1.19
PTPN4-208ENST00000460289 CAPN5O15484 640 aaPredicted RBP22.49■■□□□ 1.19
PTPN4-208ENST00000460289 POLBP06746 335 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 GSTM1P09488 218 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 ANKRD34CP0C6C1 535 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 KCNJ1P48048 391 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 ARSDP51689 593 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 BASP1P80723 227 aaKnown RBP22.49■■□□□ 1.19
PTPN4-208ENST00000460289 MC2RQ01718 297 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 GSTM4Q03013 218 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 VAC14Q08AM6 782 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 ITIH4Q14624 930 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 GSE1Q14687 1217 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 TSTD2Q5T7W7 516 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 LYPLAL1Q5VWZ2 237 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 ZNF449Q6P9G9 518 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 CCDC81Q6ZN84 652 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 ZFAND4Q86XD8 727 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 PIANPQ8IYJ0 282 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 BMPERQ8N8U9 685 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 PEX13Q92968 403 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 C12orf66Q96MD2 445 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 TGM7Q96PF1 710 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 TEFMQ96QE5 360 aaKnown RBP22.49■■□□□ 1.19
PTPN4-208ENST00000460289 RAB33BQ9H082 229 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 CPNE5Q9HCH3 593 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 FBXO8Q9NRD0 319 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 WDR70Q9NW82 654 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 EPHA6Q9UF33 1036 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 COLEC10Q9Y6Z7 277 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 PTPRQQ9UMZ3 2332 aa22.49■■□□□ 1.19
PTPN4-208ENST00000460289 CCDC162PA2VCL2 907 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 STMND1H3BQB6 276 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 QSOX1O00391 747 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 PRSS56P0CW18 603 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 NSG1P42857 185 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 GFERP55789 205 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 DBN1Q16643 649 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 CAPRIN2Q6IMN6 1127 aaKnown RBP22.48■■□□□ 1.19
PTPN4-208ENST00000460289 DTX1Q86Y01 620 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 REXO1L1PQ8IX06 675 aa22.48■■□□□ 1.19
PTPN4-208ENST00000460289 RASGEF1CQ8N431 466 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms