RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 DHRS7Q9Y394 339 aa8.83□□□□□ -1
VPS50-207ENST00000458530 USH1CQ9Y6N9 552 aa8.83□□□□□ -1
VPS50-207ENST00000458530 ATG2BQ96BY7 2078 aa8.83□□□□□ -1
VPS50-207ENST00000458530 FLNBO75369 2602 aaKnown RBP8.83□□□□□ -1
VPS50-207ENST00000458530 SLCO1B7G3V0H7 640 aa8.82□□□□□ -1
VPS50-207ENST00000458530 G3V2L1 256 aa8.82□□□□□ -1
VPS50-207ENST00000458530 K7EQS6 105 aa8.82□□□□□ -1
VPS50-207ENST00000458530 K7ESF4 209 aa8.82□□□□□ -1
VPS50-207ENST00000458530 MAN2B1O00754 1011 aa8.82□□□□□ -1
VPS50-207ENST00000458530 AREL1O15033 823 aa8.82□□□□□ -1
VPS50-207ENST00000458530 OR1I1O60431 355 aa8.82□□□□□ -1
VPS50-207ENST00000458530 NPHS1O60500 1241 aa8.82□□□□□ -1
VPS50-207ENST00000458530 KERAO60938 352 aa8.82□□□□□ -1
VPS50-207ENST00000458530 NIPSNAP2O75323 286 aa8.82□□□□□ -1
VPS50-207ENST00000458530 SNNO75324 88 aaPredicted RBP8.82□□□□□ -1
VPS50-207ENST00000458530 IPO13O94829 963 aaKnown RBP8.82□□□□□ -1
VPS50-207ENST00000458530 HSPA4LO95757 839 aa8.82□□□□□ -1
VPS50-207ENST00000458530 DNTTP04053 509 aa8.82□□□□□ -1
VPS50-207ENST00000458530 S100BP04271 92 aaPredicted RBP8.82□□□□□ -1
VPS50-207ENST00000458530 GSTM1P09488 218 aa8.82□□□□□ -1
VPS50-207ENST00000458530 PRSS56P0CW18 603 aa8.82□□□□□ -1
VPS50-207ENST00000458530 ENO3P13929 434 aaPredicted RBP8.82□□□□□ -1
VPS50-207ENST00000458530 HOXB2P14652 356 aa8.82□□□□□ -1
VPS50-207ENST00000458530 CD1DP15813 335 aa8.82□□□□□ -1
VPS50-207ENST00000458530 CNR2P34972 360 aa8.82□□□□□ -1
VPS50-207ENST00000458530 P2RY2P41231 377 aa8.82□□□□□ -1
VPS50-207ENST00000458530 KIR2DL1P43626 348 aaPredicted RBP8.82□□□□□ -1
VPS50-207ENST00000458530 MAPK9P45984 424 aa8.82□□□□□ -1
VPS50-207ENST00000458530 SOX9P48436 509 aa8.82□□□□□ -1
VPS50-207ENST00000458530 LIG3P49916 1009 aa8.82□□□□□ -1
VPS50-207ENST00000458530 CDKN1CP49918 316 aaPredicted RBP8.82□□□□□ -1
VPS50-207ENST00000458530 CCR3P51677 355 aa8.82□□□□□ -1
VPS50-207ENST00000458530 SEC13P55735 322 aa8.82□□□□□ -1
VPS50-207ENST00000458530 ABCE1P61221 599 aaKnown RBP8.82□□□□□ -1
VPS50-207ENST00000458530 NFKB2Q00653 900 aa8.82□□□□□ -1
VPS50-207ENST00000458530 SATB1Q01826 763 aa8.82□□□□□ -1
VPS50-207ENST00000458530 OCRLQ01968 901 aa8.82□□□□□ -1
VPS50-207ENST00000458530 GSTM4Q03013 218 aa8.82□□□□□ -1
VPS50-207ENST00000458530 DMWDQ09019 674 aa8.82□□□□□ -1
VPS50-207ENST00000458530 GTF2H3Q13889 308 aa8.82□□□□□ -1
VPS50-207ENST00000458530 RCN2Q14257 317 aa8.82□□□□□ -1
VPS50-207ENST00000458530 NUMA1Q14980 2115 aa8.82□□□□□ -1
VPS50-207ENST00000458530 SETDB1Q15047 1291 aa8.82□□□□□ -1
VPS50-207ENST00000458530 PON2Q15165 354 aa8.82□□□□□ -1
VPS50-207ENST00000458530 PTPRRQ15256 657 aa8.82□□□□□ -1
VPS50-207ENST00000458530 POM121L1PQ3SYA9 428 aa8.82□□□□□ -1
VPS50-207ENST00000458530 ATP13A5Q4VNC0 1218 aa8.82□□□□□ -1
VPS50-207ENST00000458530 TMEM196Q5HYL7 178 aa8.82□□□□□ -1
VPS50-207ENST00000458530 LRRC73Q5JTD7 316 aa8.82□□□□□ -1
VPS50-207ENST00000458530 TXNDC11Q6PKC3 985 aa8.82□□□□□ -1
VPS50-207ENST00000458530 FRA10AC1Q70Z53 315 aa8.82□□□□□ -1
VPS50-207ENST00000458530 HSD11B1LQ7Z5J1 315 aa8.82□□□□□ -1
VPS50-207ENST00000458530 TECPR1Q7Z6L1 1165 aa8.82□□□□□ -1
VPS50-207ENST00000458530 PIM3Q86V86 326 aa8.82□□□□□ -1
VPS50-207ENST00000458530 KBTBD6Q86V97 674 aa8.82□□□□□ -1
VPS50-207ENST00000458530 NLRP8Q86W28 1048 aa8.82□□□□□ -1
VPS50-207ENST00000458530 MYO1HQ8N1T3 1032 aa8.82□□□□□ -1
VPS50-207ENST00000458530 ZBTB2Q8N680 514 aa8.82□□□□□ -1
VPS50-207ENST00000458530 CD200R1Q8TD46 325 aa8.82□□□□□ -1
VPS50-207ENST00000458530 KIAA1191Q96A73 305 aa8.82□□□□□ -1
VPS50-207ENST00000458530 LINGO1Q96FE5 620 aa8.82□□□□□ -1
VPS50-207ENST00000458530 PDLIM5Q96HC4 596 aaKnown RBP8.82□□□□□ -1
VPS50-207ENST00000458530 COQ10AQ96MF6 247 aa8.82□□□□□ -1
VPS50-207ENST00000458530 GPR78Q96P69 363 aa8.82□□□□□ -1
VPS50-207ENST00000458530 GABRG3Q99928 467 aa8.82□□□□□ -1
VPS50-207ENST00000458530 USB1Q9BQ65 265 aaKnown RBP8.82□□□□□ -1
VPS50-207ENST00000458530 TRMOQ9BU70 441 aa8.82□□□□□ -1
VPS50-207ENST00000458530 WWP1Q9H0M0 922 aa8.82□□□□□ -1
VPS50-207ENST00000458530 SARS2Q9NP81 518 aaKnown RBP8.82□□□□□ -1
VPS50-207ENST00000458530 SLCO1B3Q9NPD5 702 aa8.82□□□□□ -1
VPS50-207ENST00000458530 ZNF358Q9NW07 568 aa8.82□□□□□ -1
VPS50-207ENST00000458530 CPSF2Q9P2I0 782 aaKnown RBP8.82□□□□□ -1
VPS50-207ENST00000458530 SARDHQ9UL12 918 aa8.82□□□□□ -1
VPS50-207ENST00000458530 RAB23Q9ULC3 237 aa8.82□□□□□ -1
VPS50-207ENST00000458530 RNF112Q9ULX5 631 aa8.82□□□□□ -1
VPS50-207ENST00000458530 DSPP15924 2871 aaKnown RBP8.81□□□□□ -1
VPS50-207ENST00000458530 A0A0U1RQS6 177 aa8.81□□□□□ -1
VPS50-207ENST00000458530 TARM1B6A8C7 271 aa8.81□□□□□ -1
VPS50-207ENST00000458530 SNX2O60749 519 aa8.81□□□□□ -1
VPS50-207ENST00000458530 SLC25A14O95258 325 aaPredicted RBP8.81□□□□□ -1
VPS50-207ENST00000458530 KLF8O95600 359 aaPredicted RBP8.81□□□□□ -1
VPS50-207ENST00000458530 CHRNB1P11230 501 aa8.81□□□□□ -1
VPS50-207ENST00000458530 C6P13671 934 aa8.81□□□□□ -1
VPS50-207ENST00000458530 ATP1B2P14415 290 aaPredicted RBP8.81□□□□□ -1
VPS50-207ENST00000458530 UGT1A6P19224 532 aa8.81□□□□□ -1
VPS50-207ENST00000458530 UGT1A1P22309 533 aa8.81□□□□□ -1
VPS50-207ENST00000458530 UGT1A4P22310 534 aa8.81□□□□□ -1
VPS50-207ENST00000458530 UGT1A3P35503 534 aa8.81□□□□□ -1
VPS50-207ENST00000458530 UGT1A5P35504 534 aa8.81□□□□□ -1
VPS50-207ENST00000458530 ETV3P41162 512 aa8.81□□□□□ -1
VPS50-207ENST00000458530 CLCN7P51798 805 aa8.81□□□□□ -1
VPS50-207ENST00000458530 SEMG2Q02383 582 aa8.81□□□□□ -1
VPS50-207ENST00000458530 CREB5Q02930 508 aa8.81□□□□□ -1
VPS50-207ENST00000458530 DPTQ07507 201 aa8.81□□□□□ -1
VPS50-207ENST00000458530 DMTNQ08495 405 aa8.81□□□□□ -1
VPS50-207ENST00000458530 CNTN1Q12860 1018 aa8.81□□□□□ -1
VPS50-207ENST00000458530 DLG1Q12959 904 aa8.81□□□□□ -1
VPS50-207ENST00000458530 PRKAA1Q13131 559 aa8.81□□□□□ -1
VPS50-207ENST00000458530 LPAL2Q16609 132 aa8.81□□□□□ -1
VPS50-207ENST00000458530 GPRC6AQ5T6X5 926 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms