RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PLA2G16P53816 162 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 ACAP2Q15057 778 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 CA9Q16790 459 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 ERICH5Q6P6B1 374 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 NAT14Q8WUY8 206 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 HOPXQ9BPY8 73 aaPredicted RBP19.44■□□□□ 0.7
SNX27-204ENST00000458013 RBM4BQ9BQ04 359 aaKnown RBP19.44■□□□□ 0.7
SNX27-204ENST00000458013 RBM4Q9BWF3 364 aaKnown RBP19.44■□□□□ 0.7
SNX27-204ENST00000458013 HIPK3Q9H422 1215 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 POLR3BQ9NW08 1133 aaPredicted RBP19.44■□□□□ 0.7
SNX27-204ENST00000458013 MAPK8P45983 427 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 ARF3P61204 181 aaPredicted RBP19.44■□□□□ 0.7
SNX27-204ENST00000458013 ARF1P84077 181 aaKnown RBP19.44■□□□□ 0.7
SNX27-204ENST00000458013 FOXM1Q08050 763 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 IQCHQ86VS3 1027 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 OR8H3Q8N146 312 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 ANGPTL1O95841 491 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 PGRP06401 933 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 S100A6P06703 90 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 HYAL2Q12891 473 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 ARMCX6Q7L4S7 300 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 THAP5Q7Z6K1 395 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 CLNKQ7Z7G1 428 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 MCEMP1Q8IX19 187 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 OR5T3Q8NGG3 340 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 DPEP2Q9H4A9 486 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 EBF3Q9H4W6 596 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 FKBPLQ9UIM3 349 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 MID1O15344 667 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 CD247P20963 164 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 ARL14EPQ8N8R7 260 aaPredicted RBP19.44■□□□□ 0.7
SNX27-204ENST00000458013 KCNC2Q96PR1 638 aa19.44■□□□□ 0.7
SNX27-204ENST00000458013 DDX6P26196 483 aaKnown RBP eCLIP19.43■□□□□ 0.7
SNX27-204ENST00000458013 KIR3DL1P43629 444 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 RGS8P57771 180 aaPredicted RBP19.43■□□□□ 0.7
SNX27-204ENST00000458013 VGLL2Q8N8G2 317 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 TRMT61BQ9BVS5 477 aaKnown RBP19.43■□□□□ 0.7
SNX27-204ENST00000458013 PLEKHA1Q9HB21 404 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 RNF144AP50876 292 aaPredicted RBP19.43■□□□□ 0.7
SNX27-204ENST00000458013 MON1BQ7L1V2 547 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 RIMS1Q86UR5 1692 aaKnown RBP19.43■□□□□ 0.7
SNX27-204ENST00000458013 MPP5Q8N3R9 675 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 PLD5Q8N7P1 536 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 TLE6Q9H808 572 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 GPN1Q9HCN4 374 aaPredicted RBP19.43■□□□□ 0.7
SNX27-204ENST00000458013 ZSCAN5BA6NJL1 495 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 IL12BP29460 328 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 ATP13A5Q4VNC0 1218 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 CLEC12AQ5QGZ9 265 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 SLC9A4Q6AI14 798 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 MREGQ8N565 214 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 TRPV1Q8NER1 839 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 PSMG2Q969U7 264 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 TVP23BQ9NYZ1 205 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 TSPAN4O14817 238 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 C4BPAP04003 597 aaKnown RBP19.43■□□□□ 0.7
SNX27-204ENST00000458013 ZNF627Q7L945 461 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 CPNE9Q8IYJ1 553 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 OR5AK3PQ8NH89 298 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 HEXDCQ8WVB3 486 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 GAL3ST3Q96A11 431 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 MED28Q9H204 178 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 SNTG1Q9NSN8 517 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 PFDN2Q9UHV9 154 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 SLC31A1O15431 190 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 TTKP33981 857 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 LARS2Q15031 903 aaKnown RBP19.43■□□□□ 0.7
SNX27-204ENST00000458013 SLC9B1Q4ZJI4 515 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 MON1AQ86VX9 555 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 CPNE8Q86YQ8 564 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 PDZD7Q9H5P4 517 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 BRD7Q9NPI1 651 aa19.43■□□□□ 0.7
SNX27-204ENST00000458013 DUS2Q9NX74 493 aaKnown RBP19.43■□□□□ 0.7
SNX27-204ENST00000458013 BBIP1A8MTZ0 92 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 CHAF1BQ13112 559 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 YTHDF3Q7Z739 585 aaKnown RBP19.42■□□□□ 0.7
SNX27-204ENST00000458013 SPERTQ8NA61 448 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 GPR20Q99678 358 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 SMIM28A0A1B0GU29 152 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 RIIAD1A6NNX1 92 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 OR7A10O76100 309 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 ALOX5P09917 674 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 ACADLP28330 430 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 TMEM220Q6QAJ8 160 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 GALNT13Q8IUC8 556 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 CPA6Q8N4T0 437 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 FITM2Q8N6M3 262 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 BORCS5Q969J3 196 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 BTN2A3PQ96KV6 586 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 RIPOR3Q96MK2 946 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 LENG8Q96PV6 779 aaPredicted RBP19.42■□□□□ 0.7
SNX27-204ENST00000458013 PNO1Q9NRX1 252 aaKnown RBP19.42■□□□□ 0.7
SNX27-204ENST00000458013 FADS2P1A8MWK0 482 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 SNX4O95219 450 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 CREMQ03060 361 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 SLC13A2Q13183 592 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 MED27Q6P2C8 311 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 TNFAIP8L2Q6P589 184 aaPredicted RBP19.42■□□□□ 0.7
SNX27-204ENST00000458013 GPR135Q8IZ08 494 aa19.42■□□□□ 0.7
SNX27-204ENST00000458013 WASF2Q9Y6W5 498 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms