RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 TTC1Q99614 292 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 WASH6PQ9NQA3 447 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 PRDM8Q9NQV8 689 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 NCKIPSDQ9NZQ3 722 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 SIRPGQ9P1W8 387 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 PADI4Q9UM07 663 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 DNAJC16Q9Y2G8 782 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 PCDHGA1Q9Y5H4 931 aa9.88□□□□□ -0.83
ATG4A-206ENST00000457035 TRBV23OR9-2A0A075B6M9 112 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 CPED1A4D0V7 1026 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 KLHL33A6NCF5 533 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 B4DGG1 531 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 EIF3HO15372 352 aaKnown RBP eCLIP9.87□□□□□ -0.83
ATG4A-206ENST00000457035 AP2A2O94973 939 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 S1PR4O95977 384 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 PROS1P07225 676 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 FTH1P19P0C7X4 201 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 F3P13726 295 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 BRAFP15056 766 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 IDSP22304 550 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 DEKP35659 375 aaKnown RBP9.87□□□□□ -0.83
ATG4A-206ENST00000457035 RPIAP49247 311 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 TTPAP49638 278 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 DUSP3P51452 185 aaPredicted RBP9.87□□□□□ -0.83
ATG4A-206ENST00000457035 DAB2P98082 770 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 GUCY2DQ02846 1103 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 NFE2L1Q14494 772 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 CRYMQ14894 314 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 FASTKD3Q14CZ7 662 aaKnown RBP9.87□□□□□ -0.83
ATG4A-206ENST00000457035 NR0B2Q15466 257 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 LONRF1Q17RB8 773 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 TYSND1Q2T9J0 566 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 C14orf28Q4W4Y0 310 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 AARS2Q5JTZ9 985 aaKnown RBP9.87□□□□□ -0.83
ATG4A-206ENST00000457035 SPANXN3Q5MJ09 141 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 STEAP4Q687X5 459 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 MRNIPQ6NTE8 343 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 GUSBP11Q6P575 273 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 ABRAXAS1Q6UWZ7 409 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 UNQ6494/PRO21346Q6UXR6 183 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 UNC5AQ6ZN44 842 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 CENPUQ71F23 418 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 SDCCAG8Q86SQ7 713 aaPredicted RBP9.87□□□□□ -0.83
ATG4A-206ENST00000457035 CILP2Q8IUL8 1156 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 SFRP1Q8N474 314 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 ARL14Q8N4G2 192 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 KYQ8NBH2 561 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.87□□□□□ -0.83
ATG4A-206ENST00000457035 LRRN4CLQ8ND94 238 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 OR2L2Q8NH16 312 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 BIRC8Q96P09 236 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 TCF12Q99081 682 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 CCM2Q9BSQ5 444 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 P2RY12Q9H244 342 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 EPB41L5Q9HCM4 733 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 ZDHHC18Q9NUE0 388 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 SCHIP1Q9P0W5 487 aaPredicted RBP9.87□□□□□ -0.83
ATG4A-206ENST00000457035 ZC3H7BQ9UGR2 993 aaKnown RBP9.87□□□□□ -0.83
ATG4A-206ENST00000457035 CHMP2BQ9UQN3 213 aa9.87□□□□□ -0.83
ATG4A-206ENST00000457035 OR5K4A6NMS3 321 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 PRMT5O14744 637 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 SEC16AO15027 2179 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 PPM1DO15297 605 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 SNX2O60749 519 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 NDUFS3O75489 264 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 GP1BAP07359 652 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 ERVK-10P10266 1014 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 PNLIPP16233 465 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 GLB1P16278 677 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 VCLP18206 1134 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 XRCC1P18887 633 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 OGNP20774 298 aaKnown RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 RPS3P23396 243 aaKnown RBP eCLIP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 RPL10P27635 214 aaKnown RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 SLC19A1P41440 591 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 ADARP55265 1226 aaKnown RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 MAZP56270 477 aaKnown RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 CTBP1Q13363 440 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 ILKQ13418 452 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 THOC5Q13769 683 aaKnown RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 FRG1Q14331 258 aaKnown RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 CLCA4Q14CN2 919 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 SMAD1Q15797 465 aaKnown RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 HSP90AA5PQ58FG0 334 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 ZNF789Q5FWF6 425 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 PERM1Q5SV97 790 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 AGAP9Q5VTM2 703 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 ANKMY2Q8IV38 441 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 DENND6AQ8IWF6 608 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 LMNTD2Q8IXW0 634 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 CFAP206Q8IYR0 622 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 ZBED8Q8IZ13 594 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 COL27A1Q8IZC6 1860 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 LILRA3Q8N6C8 439 aaPredicted RBP9.86□□□□□ -0.83
ATG4A-206ENST00000457035 FBXO36Q8NEA4 188 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 OR6C4Q8NGE1 309 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 IFI44Q8TCB0 444 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 LPGAT1Q92604 370 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 PRR14Q9BWN1 585 aa9.86□□□□□ -0.83
ATG4A-206ENST00000457035 FOXP3Q9BZS1 431 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms