RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 SEMA6CQ9H3T2 930 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 BFARQ9NZS9 450 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 ZNF624Q9P2J8 865 aaPredicted RBP17.01■□□□□ 0.31
USP39-208ENST00000455732 SLC2A6Q9UGQ3 507 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.01■□□□□ 0.312e-8■■■□□ 16.1
USP39-208ENST00000455732 PIKFYVEQ9Y2I7 2098 aa17.01■□□□□ 0.31
USP39-208ENST00000455732 TCRBV7S3A2A0A539 114 aa17■□□□□ 0.31
USP39-208ENST00000455732 CCDC78A2IDD5 438 aa17■□□□□ 0.31
USP39-208ENST00000455732 DUX1O43812 170 aa17■□□□□ 0.31
USP39-208ENST00000455732 AP2A2O94973 939 aa17■□□□□ 0.31
USP39-208ENST00000455732 PRSS56P0CW18 603 aa17■□□□□ 0.31
USP39-208ENST00000455732 HGFP14210 728 aa17■□□□□ 0.31
USP39-208ENST00000455732 RPL10P27635 214 aaKnown RBP17■□□□□ 0.31
USP39-208ENST00000455732 CSF2RBP32927 897 aa17■□□□□ 0.31
USP39-208ENST00000455732 SLC19A1P41440 591 aa17■□□□□ 0.31
USP39-208ENST00000455732 HALP42357 657 aa17■□□□□ 0.31
USP39-208ENST00000455732 VPS41P49754 854 aa17■□□□□ 0.31
USP39-208ENST00000455732 DRG2P55039 364 aaKnown RBP17■□□□□ 0.31
USP39-208ENST00000455732 SESN2P58004 480 aaPredicted RBP17■□□□□ 0.31
USP39-208ENST00000455732 CFHR1Q03591 330 aa17■□□□□ 0.31
USP39-208ENST00000455732 NFE2L1Q14494 772 aa17■□□□□ 0.31
USP39-208ENST00000455732 DBN1Q16643 649 aa17■□□□□ 0.31
USP39-208ENST00000455732 XKR5Q6UX68 686 aa17■□□□□ 0.31
USP39-208ENST00000455732 TAS2R42Q7RTR8 314 aa17■□□□□ 0.31
USP39-208ENST00000455732 ZNF761Q86XN6 746 aaPredicted RBP17■□□□□ 0.31
USP39-208ENST00000455732 BEND7Q8N7W2 519 aaPredicted RBP17■□□□□ 0.31
USP39-208ENST00000455732 OR4D9Q8NGE8 314 aa17■□□□□ 0.31
USP39-208ENST00000455732 HM13Q8TCT9 377 aa17■□□□□ 0.31
USP39-208ENST00000455732 SLCO2A1Q92959 643 aa17■□□□□ 0.31
USP39-208ENST00000455732 HDAC10Q969S8 669 aa17■□□□□ 0.31
USP39-208ENST00000455732 TBRG4Q969Z0 631 aaKnown RBP eCLIP17■□□□□ 0.31
USP39-208ENST00000455732 VPS37BQ9H9H4 285 aa17■□□□□ 0.31
USP39-208ENST00000455732 MRM3Q9HC36 420 aaKnown RBP17■□□□□ 0.31
USP39-208ENST00000455732 TREX1Q9NSU2 369 aa17■□□□□ 0.31
USP39-208ENST00000455732 ACSL5Q9ULC5 683 aa17■□□□□ 0.31
USP39-208ENST00000455732 WDR37Q9Y2I8 494 aa17■□□□□ 0.31
USP39-208ENST00000455732 SSUH2Q9Y2M2 353 aa17■□□□□ 0.31
USP39-208ENST00000455732 C17orf113A0A1B0GUU1 675 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 CTAGE9A4FU28 777 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 OR51F1A6NGY5 319 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 OR52A4PA6NMU1 304 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 QSOX1O00391 747 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 GOT2P00505 430 aaKnown RBP16.99■□□□□ 0.31
USP39-208ENST00000455732 VIPP01282 170 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 GSTM1P09488 218 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 NSG1P42857 185 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 SARNPP82979 210 aaKnown RBP16.99■□□□□ 0.31
USP39-208ENST00000455732 GSTM4Q03013 218 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 TRA2AQ13595 282 aaKnown RBP eCLIP16.99■□□□□ 0.31
USP39-208ENST00000455732 CLCA4Q14CN2 919 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 ZNF658BQ4V348 819 aaPredicted RBP16.99■□□□□ 0.31
USP39-208ENST00000455732 SOWAHCQ53LP3 525 aaPredicted RBP16.99■□□□□ 0.31
USP39-208ENST00000455732 LYPLAL1Q5VWZ2 237 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 NKAIN2Q5VXU1 208 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 WDR74Q6RFH5 385 aaPredicted RBP16.99■□□□□ 0.31
USP39-208ENST00000455732 CERS6Q6ZMG9 384 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 TMEM26Q6ZUK4 368 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 MICALCLQ6ZW33 695 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 CREG2Q8IUH2 290 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 TRIM48Q8IWZ4 208 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 MCUQ8NE86 351 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 CPT1BQ92523 772 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 NAF1Q96HR8 494 aaKnown RBP16.99■□□□□ 0.31
USP39-208ENST00000455732 KIFC1Q9BW19 673 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 PRORYQ9H606 182 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 SLC40A1Q9NP59 571 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 PDP2Q9P2J9 529 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 LOXL2Q9Y4K0 774 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 PCDHGA7Q9Y5G6 932 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 SAR1BQ9Y6B6 198 aa16.99■□□□□ 0.31
USP39-208ENST00000455732 SDK2Q58EX2 2172 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 IGHV5-10-1A0A0J9YXX1 117 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 EIF4E1BA6NMX2 242 aaKnown RBP16.98■□□□□ 0.31
USP39-208ENST00000455732 HGSO14964 777 aaPredicted RBP16.98■□□□□ 0.31
USP39-208ENST00000455732 FANCGO15287 622 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 TMEM63AO94886 807 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 THRAP10827 490 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 MLNP12872 115 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 PBLDP30039 288 aaPredicted RBP16.98■□□□□ 0.31
USP39-208ENST00000455732 LIMK2P53671 638 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 PRAMEP78395 509 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 C16orf72Q14CZ0 275 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 KCTD19Q17RG1 926 aaPredicted RBP16.98■□□□□ 0.31
USP39-208ENST00000455732 PHF19Q5T6S3 580 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 ANKRD22Q5VYY1 191 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 TMEM71Q6P5X7 295 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 OR4L1Q8NH43 312 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 NAT14Q8WUY8 206 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 KCNE4Q8WWG9 221 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 CXorf40BQ96DE9 158 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 AHCYL2Q96HN2 611 aaKnown RBP16.98■□□□□ 0.31
USP39-208ENST00000455732 CMKLR1Q99788 373 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 DPH1Q9BZG8 443 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 CHRAC1Q9NRG0 131 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 PCYOX1Q9UHG3 505 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 ACSL6Q9UKU0 697 aa16.98■□□□□ 0.31
USP39-208ENST00000455732 JMJD7P0C870 316 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 ITIH1P19827 911 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 MGAT1P26572 445 aa16.97■□□□□ 0.31
USP39-208ENST00000455732 SLC5A2P31639 672 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms