RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 GRIA2P42262 883 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 APLP1P51693 650 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 DEFB103AP81534 67 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 TXNL4AP83876 142 aaKnown RBP14.84□□□□□ -0.03
LDLR-202ENST00000455727 MTX3Q5HYI7 312 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 PAGE3Q5JUK9 113 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 PPP4R4Q6NUP7 873 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 FAM117BQ6P1L5 589 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 TMCO2Q7Z6W1 182 aaPredicted RBP14.84□□□□□ -0.03
LDLR-202ENST00000455727 ZFAND4Q86XD8 727 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 SFRP1Q8N474 314 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 DPP10Q8N608 796 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 ZBTB2Q8N680 514 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 SLC45A3Q96JT2 553 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 LMLNQ96KR4 655 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 CNBD2Q96M20 576 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 C17orf80Q9BSJ5 609 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 SPATA16Q9BXB7 569 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 IPPKQ9H8X2 491 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 RDH14Q9HBH5 336 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 TMEM39AQ9NV64 488 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 KLHL42Q9P2K6 505 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 CRLS1Q9UJA2 301 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 INTS6Q9UL03 887 aaKnown RBP14.84□□□□□ -0.03
LDLR-202ENST00000455727 CLEC4EQ9ULY5 219 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 PRSS21Q9Y6M0 314 aa14.84□□□□□ -0.03
LDLR-202ENST00000455727 TRAV19A0A0A6YYK7 116 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 SMIM31A0A1B0GVY4 71 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 C7orf72A4D263 438 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 LSM1O15116 133 aaKnown RBP14.83□□□□□ -0.03
LDLR-202ENST00000455727 TAPBPO15533 448 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 TGM5O43548 720 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 GPIP06744 558 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 FAM58BPP0C7Q3 252 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 SPATA31D3P0C874 917 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 IL10P22301 178 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 CD70P32970 193 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 SNRPD1P62314 119 aaKnown RBP14.83□□□□□ -0.03
LDLR-202ENST00000455727 TRAF3Q13114 568 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 CHRNA6Q15825 494 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 SMU1Q2TAY7 513 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 SULT1C3Q6IMI6 304 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 IL27RAQ6UWB1 636 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 TPGS1Q6ZTW0 290 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 SPATA31D4Q6ZUB0 917 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 NXPE1Q8N323 547 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 CLDN19Q8N6F1 224 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 PACRGLQ8N7B6 248 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 PAF1Q8N7H5 531 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 LKAAEAR1Q8TD35 194 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 VOPP1Q96AW1 172 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 PPWD1Q96BP3 646 aaKnown RBP14.83□□□□□ -0.03
LDLR-202ENST00000455727 ECHDC3Q96DC8 303 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 C1orf50Q9BV19 199 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 ALG2Q9H553 416 aa14.83□□□□□ -0.03
LDLR-202ENST00000455727 NSUN3Q9H649 340 aaKnown RBP14.83□□□□□ -0.03
LDLR-202ENST00000455727 HELZP42694 1942 aaKnown RBP14.83□□□□□ -0.04
LDLR-202ENST00000455727 ARNTLO00327 626 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 EFCAB14O75071 495 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 BAIAP3O94812 1187 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 TRIM16O95361 564 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 LRG1P02750 347 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 UGT1A6P19224 532 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 UGT1A1P22309 533 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 UGT1A4P22310 534 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 PSMA4P25789 261 aaKnown RBP14.83□□□□□ -0.04
LDLR-202ENST00000455727 IL12AP29459 219 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 GKP32189 559 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 UGT1A3P35503 534 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 UGT1A5P35504 534 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 YBX1P67809 324 aaKnown RBP14.83□□□□□ -0.04
LDLR-202ENST00000455727 MYBPC1Q00872 1141 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 FXNQ16595 210 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 C18orf21Q32NC0 220 aaPredicted RBP14.83□□□□□ -0.04
LDLR-202ENST00000455727 NAIF1Q69YI7 327 aaPredicted RBP14.83□□□□□ -0.04
LDLR-202ENST00000455727 TPRG1Q6ZUI0 275 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 MILR1Q7Z6M3 343 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 ZSWIM9Q86XI8 627 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 SPPL2CQ8IUH8 684 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 CHERPQ8IWX8 916 aaKnown RBP14.83□□□□□ -0.04
LDLR-202ENST00000455727 UBTD2Q8WUN7 234 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 SCRN2Q96FV2 425 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 CD244Q9BZW8 370 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 ZBP1Q9H171 429 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 TNKS2Q9H2K2 1166 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 PIDD1Q9HB75 910 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 PADI4Q9UM07 663 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 LZTS1Q9Y250 596 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 HS3ST2Q9Y278 367 aa14.83□□□□□ -0.04
LDLR-202ENST00000455727 KANSL1LA0AUZ9 987 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 ARPC2O15144 300 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 TIPRLO75663 272 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 ENO2P09104 434 aaPredicted RBP14.82□□□□□ -0.04
LDLR-202ENST00000455727 CNPP09543 421 aaKnown RBP14.82□□□□□ -0.04
LDLR-202ENST00000455727 CBSLP0DN79 551 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 CTSAP10619 480 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 SRCP12931 536 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 PSMC3P17980 439 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 CBSP35520 551 aa14.82□□□□□ -0.04
LDLR-202ENST00000455727 NSG1P42857 185 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms