RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 CYP17A1P05093 508 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 C1SP09871 688 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 SPINT3P49223 89 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 EPHA5P54756 1037 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 MTTPP55157 894 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 SWT1Q5T5J6 900 aaKnown RBP13.45□□□□□ -0.26
CLK3-203ENST00000454830 BHLHE22Q8NFJ8 381 aaPredicted RBP13.45□□□□□ -0.26
CLK3-203ENST00000454830 SP7Q8TDD2 431 aaPredicted RBP13.45□□□□□ -0.26
CLK3-203ENST00000454830 LRRC3BQ96PB8 259 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 TRIM54Q9BYV2 358 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 S100A14Q9HCY8 104 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 RIC8BQ9NVN3 520 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 KLQ9UEF7 1012 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 IL36AQ9UHA7 158 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 TNPO3Q9Y5L0 923 aaKnown RBP13.45□□□□□ -0.26
CLK3-203ENST00000454830 TBC1D3BA6NDS4 549 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 TXNDC9O14530 226 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 ELFN1P0C7U0 828 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 UROSP10746 265 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 INHBCP55103 352 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 IMPG1Q17R60 797 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 ATP6AP1LQ52LC2 224 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 KANK2Q63ZY3 851 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 CYP2R1Q6VVX0 501 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 GOLGA7Q7Z5G4 137 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 PCYOX1LQ8NBM8 494 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 NRG4Q8WWG1 115 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 CEP44Q9C0F1 390 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 KCTD5Q9NXV2 234 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 DEC1Q9P2X7 70 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 CROTQ9UKG9 612 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 PRPF19Q9UMS4 504 aaKnown RBP13.45□□□□□ -0.26
CLK3-203ENST00000454830 SLC22A2O15244 555 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 CCNIQ14094 377 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 UGT3A2Q3SY77 523 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 BRAT1Q6PJG6 821 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 SBSNQ6UWP8 590 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 SERPINA13PQ6UXR4 307 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 HSD11B1LQ7Z5J1 315 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 PELI3Q8N2H9 469 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 ZNF570Q96NI8 536 aa13.45□□□□□ -0.26
CLK3-203ENST00000454830 CPEB1Q9BZB8 566 aaKnown RBP13.45□□□□□ -0.26
CLK3-203ENST00000454830 E7ENX8 843 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 PLK4O00444 970 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 SLC6A11P48066 632 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 ADARP55265 1226 aaKnown RBP13.44□□□□□ -0.26
CLK3-203ENST00000454830 KCNK10P57789 538 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 ERVPABLB-1P60509 514 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 CEACAM7Q14002 265 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 DMC1Q14565 340 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 HERC3Q15034 1050 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 SYTL3Q4VX76 610 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 IZUMO2Q6UXV1 221 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 UBE2R2Q712K3 238 aaPredicted RBP13.44□□□□□ -0.26
CLK3-203ENST00000454830 EFL1Q7Z2Z2 1120 aaKnown RBP13.44□□□□□ -0.26
CLK3-203ENST00000454830 C12orf40Q86WS4 652 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 OR4F6Q8NGB9 312 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 PYCR2Q96C36 320 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 MCOLN1Q9GZU1 580 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 EPS15L1Q9UBC2 864 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 BCAP29Q9UHQ4 241 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 NOTCH4Q99466 2003 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 F5P12259 2224 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 KRT87PA6NCN2 255 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 UPK3BL1B0FP48 263 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 UPK3BL2E5RIL1 263 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 FGF4P08620 206 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 RPIAP49247 311 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 HTR6P50406 440 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 CAPRIN1Q14444 709 aaKnown RBP13.44□□□□□ -0.26
CLK3-203ENST00000454830 LPCAT4Q643R3 524 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 ERAP2Q6P179 960 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 LETMD1Q6P1Q0 360 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 FBXL19Q6PCT2 694 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 CYHR1Q6ZMK1 362 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 BPIFB1Q8TDL5 484 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 GDPD5Q8WTR4 605 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 VPS33AQ96AX1 596 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 ZNF707Q96C28 371 aaPredicted RBP13.44□□□□□ -0.26
CLK3-203ENST00000454830 PCDHAC1Q9H158 963 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 ACTR8Q9H981 624 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 MRGBPQ9NV56 204 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 ZDHHC7Q9NXF8 308 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 CACNA2D2Q9NY47 1150 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 COQ6Q9Y2Z9 468 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 KIAA1671Q9BY89 1806 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 E2F3O00716 465 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 SLC7A2P52569 658 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 CPSF6Q16630 551 aaKnown RBP eCLIP13.44□□□□□ -0.26
CLK3-203ENST00000454830 CDKN3Q16667 212 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 PGM2L1Q6PCE3 622 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 CBARPQ8N350 705 aaPredicted RBP13.44□□□□□ -0.26
CLK3-203ENST00000454830 JADE3Q92613 823 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 OTUB2Q96DC9 234 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 TRIM8Q9BZR9 551 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 ZNF385DQ9H6B1 395 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 DYRK4Q9NR20 520 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 NDUFAF1Q9Y375 327 aa13.44□□□□□ -0.26
CLK3-203ENST00000454830 C16orf96A6NNT2 1141 aa13.43□□□□□ -0.26
CLK3-203ENST00000454830 OTCP00480 354 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms