RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 TM6SF2Q9BZW4 377 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 FAM117AQ9C073 453 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 TUBB1Q9H4B7 451 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 TMEM74BQ9NUR3 256 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 ARL8BQ9NVJ2 186 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 ZDHHC3Q9NYG2 299 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 SH2B3Q9UQQ2 575 aa4.87□□□□□ -1.63
RIF1-207ENST00000454583 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.87□□□□□ -1.63
RIF1-207ENST00000454583 A8MUI8 341 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 MATN2O00339 956 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 EBAG9O00559 213 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 TNFRSF10CO14798 259 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 SLC22A2O15244 555 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 CYBBP04839 570 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 POLBP06746 335 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 MSL3P1P0C860 447 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 MYCLP1P12525 358 aaPredicted RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 SERPINA4P29622 427 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 PRDX6P30041 224 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 GP5P40197 560 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 DGKEP52429 567 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 HK2P52789 917 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 BASP1P80723 227 aaKnown RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 BCL2L1Q07817 233 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 PCBP2Q15366 365 aaKnown RBP eCLIP4.86□□□□□ -1.63
RIF1-207ENST00000454583 CCDC85BQ15834 202 aaPredicted RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 PREPLQ4J6C6 727 aaPredicted RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 TJAP1Q5JTD0 557 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 HECTD2Q5U5R9 776 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 ZNF776Q68DI1 518 aaPredicted RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 KIAA0895LQ68EN5 471 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 SERPINA13PQ6UXR4 307 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 LILRA3Q8N6C8 439 aaPredicted RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 TMEM74Q96NL1 305 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 NRTNQ99748 197 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 DRC3Q9H069 523 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 LHX9Q9NQ69 397 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 ZNF358Q9NW07 568 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 PDP2Q9P2J9 529 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 NKX1-2Q9UD57 310 aaPredicted RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 PPT2Q9UMR5 302 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 LRRC42Q9Y546 428 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 CLDN16Q9Y5I7 305 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 USH1CQ9Y6N9 552 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 EML6Q6ZMW3 1958 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 SPTY2D1-AS1A0A0U1RR47 76 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 TRIM49D1C9J1S8 452 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 ANKRD65E5RJM6 399 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 TNFSF14O43557 240 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 ZBTB14O43829 449 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 NOBOXO60393 691 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 PMPCBO75439 489 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 UGT2B4P06133 528 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 CTPS1P17812 591 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 MC4RP32245 332 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 DPP6P42658 865 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 RXRGP48443 463 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 IDH3AP50213 366 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 IFT88Q13099 833 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 CTBP1Q13363 440 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 ZNF460Q14592 562 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 NAA25Q14CX7 972 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 FBXW10Q5XX13 1052 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 ABRAXAS1Q6UWZ7 409 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 HORMAD1Q86X24 394 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 MYLK4Q86YV6 388 aaPredicted RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 RGL4Q8IZJ4 473 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 LINC01555Q8NAE3 123 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 OR56A3Q8NH54 315 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 PPM1EQ8WY54 764 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 GLYATL1Q969I3 302 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 KIAA1191Q96A73 305 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 BIRC7Q96CA5 298 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 ELAC2Q9BQ52 826 aaKnown RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 PRR14Q9BWN1 585 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 SPRY4Q9C004 299 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 RAB33BQ9H082 229 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 TRPS1Q9UHF7 1281 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 PILRAQ9UKJ1 303 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 FBXO5Q9UKT4 447 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 OARD1Q9Y530 152 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 SMG1Q96Q15 3661 aaKnown RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 IQANK1A0A1B0GTG1 560 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 POM121BA6NF01 834 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 TRIM64A6NGJ6 449 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 C4orf51C9J302 202 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 TERTO14746 1132 aaKnown RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 SLC16A5O15375 505 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 MAGEC1O60732 1142 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 RECQL5O94762 991 aaPredicted RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 STK10O94804 968 aaKnown RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 MPOP05164 745 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 JUNP05412 331 aaKnown RBP4.86□□□□□ -1.63
RIF1-207ENST00000454583 PIRTP0C851 137 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 SMIM10L1P0DMW3 83 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 CBSLP0DN79 551 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 BGNP21810 368 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 CD72P21854 359 aa4.86□□□□□ -1.63
RIF1-207ENST00000454583 CBSP35520 551 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms