RNA–Protein interactions for RNA: ENST00000453543.5

CCDC117-206, Transcript of coiled-coil domain containing 117, humanhuman

TSL 2

Gene CCDC117, Length 1,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-206ENST00000453543 ATP1B2P14415 290 aaPredicted RBP29.41■■■□□ 2.3
CCDC117-206ENST00000453543 PSMA3P25788 255 aa29.41■■■□□ 2.3
CCDC117-206ENST00000453543 ACRV1P26436 265 aa29.41■■■□□ 2.3
CCDC117-206ENST00000453543 KCNJ1P48048 391 aa29.41■■■□□ 2.3
CCDC117-206ENST00000453543 PRLHRP49683 370 aa29.41■■■□□ 2.3
CCDC117-206ENST00000453543 TMPRSS3P57727 454 aa29.41■■■□□ 2.3
CCDC117-206ENST00000453543 KCTD19Q17RG1 926 aaPredicted RBP29.41■■■□□ 2.3
CCDC117-206ENST00000453543 TAS2R42Q7RTR8 314 aa29.41■■■□□ 2.3
CCDC117-206ENST00000453543 ZFAND4Q86XD8 727 aa29.41■■■□□ 2.3
CCDC117-206ENST00000453543 FAM129CQ86XR2 697 aa29.41■■■□□ 2.3
CCDC117-206ENST00000453543 RBM12BQ8IXT5 1001 aaKnown RBP29.41■■■□□ 2.3
CCDC117-206ENST00000453543 LILRA3Q8N6C8 439 aaPredicted RBP29.41■■■□□ 2.3
CCDC117-206ENST00000453543 ART4Q93070 314 aa29.41■■■□□ 2.3
CCDC117-206ENST00000453543 LINC00615Q96LM1 132 aaPredicted RBP29.41■■■□□ 2.3
CCDC117-206ENST00000453543 WWP1Q9H0M0 922 aa29.41■■■□□ 2.3
CCDC117-206ENST00000453543 CASS4Q9NQ75 786 aa29.41■■■□□ 2.3
CCDC117-206ENST00000453543 CFAP20Q9Y6A4 193 aaKnown RBP29.41■■■□□ 2.3
CCDC117-206ENST00000453543 OR51F1A6NGY5 319 aa29.4■■■□□ 2.3
CCDC117-206ENST00000453543 CFAP99D6REC4 459 aa29.4■■■□□ 2.3
CCDC117-206ENST00000453543 AMD1P17707 334 aa29.4■■■□□ 2.3
CCDC117-206ENST00000453543 UCNP55089 124 aa29.4■■■□□ 2.3
CCDC117-206ENST00000453543 CACNG1Q06432 222 aa29.4■■■□□ 2.3
CCDC117-206ENST00000453543 PLXDC1Q8IUK5 500 aa29.4■■■□□ 2.3
CCDC117-206ENST00000453543 HEXDCQ8WVB3 486 aa29.4■■■□□ 2.3
CCDC117-206ENST00000453543 JPH3Q8WXH2 748 aaPredicted RBP29.4■■■□□ 2.3
CCDC117-206ENST00000453543 RSC1A1Q92681 617 aa29.4■■■□□ 2.3
CCDC117-206ENST00000453543 TAAR9Q96RI9 348 aa29.4■■■□□ 2.3
CCDC117-206ENST00000453543 WDR70Q9NW82 654 aa29.4■■■□□ 2.3
CCDC117-206ENST00000453543 GAS8O95995 478 aa29.39■■■□□ 2.3
CCDC117-206ENST00000453543 MSNP26038 577 aaKnown RBP29.39■■■□□ 2.3
CCDC117-206ENST00000453543 DBN1Q16643 649 aa29.39■■■□□ 2.3
CCDC117-206ENST00000453543 SKIDA1Q1XH10 827 aa29.39■■■□□ 2.3
CCDC117-206ENST00000453543 TMEM164Q5U3C3 297 aa29.39■■■□□ 2.3
CCDC117-206ENST00000453543 BMPERQ8N8U9 685 aa29.39■■■□□ 2.3
CCDC117-206ENST00000453543 SPDYE1Q8NFV5 336 aaPredicted RBP29.39■■■□□ 2.3
CCDC117-206ENST00000453543 INSM2Q96T92 566 aaPredicted RBP29.39■■■□□ 2.3
CCDC117-206ENST00000453543 KCNF1Q9H3M0 494 aa29.39■■■□□ 2.3
CCDC117-206ENST00000453543 IMP3Q9NV31 184 aaKnown RBP29.39■■■□□ 2.3
CCDC117-206ENST00000453543 SLC2A6Q9UGQ3 507 aa29.39■■■□□ 2.3
CCDC117-206ENST00000453543 HEATR9A2RTY3 570 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 CCDC162PA2VCL2 907 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 KLHL33A6NCF5 533 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 C9P02748 559 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 LIPCP11150 499 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 MTHFD1P11586 935 aaKnown RBP29.38■■■□□ 2.29
CCDC117-206ENST00000453543 ARHGAP40Q5TG30 622 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 DUS1LQ6P1R4 473 aaKnown RBP29.38■■■□□ 2.29
CCDC117-206ENST00000453543 GSTA5Q7RTV2 222 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 GPR155Q7Z3F1 870 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 REXO1L1PQ8IX06 675 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 PRELID2Q8N945 189 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 OR13J1Q8NGT2 312 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 C12orf66Q96MD2 445 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 ZNF778Q96MU6 729 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 TGM7Q96PF1 710 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 B3GNT4Q9C0J1 378 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 SLC39A1Q9NY26 324 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 ACSL5Q9ULC5 683 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 PCDHGA3Q9Y5H0 932 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 B3GALT1Q9Y5Z6 326 aa29.38■■■□□ 2.29
CCDC117-206ENST00000453543 SDK2Q58EX2 2172 aa29.37■■■□□ 2.29
CCDC117-206ENST00000453543 B4E171 279 aa29.37■■■□□ 2.29
CCDC117-206ENST00000453543 POLBP06746 335 aa29.37■■■□□ 2.29
CCDC117-206ENST00000453543 TSPAN7P41732 249 aa29.37■■■□□ 2.29
CCDC117-206ENST00000453543 CAPZBP47756 277 aa29.37■■■□□ 2.29
CCDC117-206ENST00000453543 LEPRP48357 1165 aaKnown RBP29.37■■■□□ 2.29
CCDC117-206ENST00000453543 SRSF6Q13247 344 aaKnown RBP29.37■■■□□ 2.29
CCDC117-206ENST00000453543 CFAP206Q8IYR0 622 aa29.37■■■□□ 2.29
CCDC117-206ENST00000453543 CLDN19Q8N6F1 224 aa29.37■■■□□ 2.29
CCDC117-206ENST00000453543 HM13Q8TCT9 377 aa29.37■■■□□ 2.29
CCDC117-206ENST00000453543 C9orf72Q96LT7 481 aa29.37■■■□□ 2.29
CCDC117-206ENST00000453543 RMDN2Q96LZ7 410 aa29.37■■■□□ 2.29
CCDC117-206ENST00000453543 RANBP9Q96S59 729 aa29.37■■■□□ 2.29
CCDC117-206ENST00000453543 JRKLQ9Y4A0 524 aa29.37■■■□□ 2.29
CCDC117-206ENST00000453543 CAPN5O15484 640 aaPredicted RBP29.36■■■□□ 2.29
CCDC117-206ENST00000453543 SLC35G4P0C7Q5 338 aa29.36■■■□□ 2.29
CCDC117-206ENST00000453543 ADRA1DP25100 572 aa29.36■■■□□ 2.29
CCDC117-206ENST00000453543 FOXN2P32314 431 aa29.36■■■□□ 2.29
CCDC117-206ENST00000453543 TSTD2Q5T7W7 516 aa29.36■■■□□ 2.29
CCDC117-206ENST00000453543 HDAC10Q969S8 669 aa29.36■■■□□ 2.29
CCDC117-206ENST00000453543 MS4A14Q96JA4 679 aa29.36■■■□□ 2.29
CCDC117-206ENST00000453543 BBC3Q96PG8 261 aaPredicted RBP29.36■■■□□ 2.29
CCDC117-206ENST00000453543 DDA1Q9BW61 102 aa29.36■■■□□ 2.29
CCDC117-206ENST00000453543 CD82P27701 267 aa29.35■■■□□ 2.29
CCDC117-206ENST00000453543 BASP1P80723 227 aaKnown RBP29.35■■■□□ 2.29
CCDC117-206ENST00000453543 VAC14Q08AM6 782 aa29.35■■■□□ 2.29
CCDC117-206ENST00000453543 ZNF658BQ4V348 819 aaPredicted RBP29.35■■■□□ 2.29
CCDC117-206ENST00000453543 SOWAHCQ53LP3 525 aaPredicted RBP29.35■■■□□ 2.29
CCDC117-206ENST00000453543 ANKS6Q68DC2 871 aa29.35■■■□□ 2.29
CCDC117-206ENST00000453543 DTX1Q86Y01 620 aa29.35■■■□□ 2.29
CCDC117-206ENST00000453543 CCNL2Q96S94 520 aaPredicted RBP29.35■■■□□ 2.29
CCDC117-206ENST00000453543 EIF2B3Q9NR50 452 aaKnown RBP29.35■■■□□ 2.29
CCDC117-206ENST00000453543 SMARCAL1Q9NZC9 954 aa29.35■■■□□ 2.29
CCDC117-206ENST00000453543 TCAF1Q9Y4C2 921 aa29.35■■■□□ 2.29
CCDC117-206ENST00000453543 PIKFYVEQ9Y2I7 2098 aa29.34■■■□□ 2.29
CCDC117-206ENST00000453543 ANKRD34CP0C6C1 535 aa29.34■■■□□ 2.29
CCDC117-206ENST00000453543 PPP1CAP62136 330 aa29.34■■■□□ 2.29
CCDC117-206ENST00000453543 MC2RQ01718 297 aa29.34■■■□□ 2.29
CCDC117-206ENST00000453543 CAPRIN2Q6IMN6 1127 aaKnown RBP29.34■■■□□ 2.29
CCDC117-206ENST00000453543 C4orf22Q6V702 233 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms