RNA–Protein interactions for RNA: ENST00000453024.5

CTNNB1-210, Transcript of catenin beta 1, humanhuman

TSL 2 BASIC

Gene CTNNB1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-210ENST00000453024 LCLAT1Q6UWP7 414 aa16.43■□□□□ 0.22
CTNNB1-210ENST00000453024 AMIGO1Q86WK6 493 aa16.43■□□□□ 0.22
CTNNB1-210ENST00000453024 ZMIZ2Q8NF64 920 aa16.43■□□□□ 0.22
CTNNB1-210ENST00000453024 DEDD2Q8WXF8 326 aa16.43■□□□□ 0.22
CTNNB1-210ENST00000453024 ACOX2Q99424 681 aa16.43■□□□□ 0.22
CTNNB1-210ENST00000453024 LRRC3Q9BY71 257 aa16.43■□□□□ 0.22
CTNNB1-210ENST00000453024 MMP28Q9H239 520 aa16.43■□□□□ 0.22
CTNNB1-210ENST00000453024 RAPGEFL1Q9UHV5 662 aa16.43■□□□□ 0.22
CTNNB1-210ENST00000453024 VPS4AQ9UN37 437 aa16.43■□□□□ 0.22
CTNNB1-210ENST00000453024 GPR45Q9Y5Y3 372 aa16.43■□□□□ 0.22
CTNNB1-210ENST00000453024 ZNF638Q14966 1978 aaKnown RBP16.43■□□□□ 0.22
CTNNB1-210ENST00000453024 OR6C70A6NIJ9 312 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 EEDO75530 441 aaKnown RBP16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 CYP2A6P11509 494 aaPredicted RBP16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 PFKLP17858 780 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 LBPP18428 481 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 ATF4P18848 351 aaPredicted RBP16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 GRK5P34947 590 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 SLC1A2P43004 574 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 KCNC1P48547 511 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 SLC12A2P55011 1212 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 CAPSQ13938 189 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 RCAN2Q14206 197 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 UNC50Q53HI1 259 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 ZNF678Q5SXM1 525 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 FAM131BQ86XD5 332 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 SVOPLQ8N434 492 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 C11orf84Q9BUA3 381 aaPredicted RBP16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 ITPAQ9BY32 194 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 POLG2Q9UHN1 485 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.42■□□□□ 0.228e-9■□□□□ 9.3
CTNNB1-210ENST00000453024 RNF6Q9Y252 685 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 U3KQV3 271 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 LY75O60449 1722 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 LINC00854A0A1B0GVQ3 168 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 LOC110117498-PIK3R3F6TDL0 507 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 TRAPPC2P0DI81 140 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 TRAPPC2BP0DI82 140 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 SLC26A3P40879 764 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 SNRPD2P62316 118 aaKnown RBP16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 MVKQ03426 396 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 IL18R1Q13478 541 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 SURF1Q15526 300 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 C5orf22Q49AR2 442 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 DCAF8Q5TAQ9 597 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 BBS2Q9BXC9 721 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 COMMD8Q9NX08 183 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 TMPRSS11EQ9UL52 423 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 IPPQ9Y573 584 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 PEX16Q9Y5Y5 336 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 SIP14410 1827 aa16.42■□□□□ 0.22
CTNNB1-210ENST00000453024 ATP6V1G2-DDX39BF2Z307 99 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 INO80B-WBP1J3KQ70 363 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 PDPK1O15530 556 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 FAM20BO75063 409 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 ICAM2P13598 275 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 ATICP31939 592 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 DCTP40126 519 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 MAGEA11P43364 429 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 MTPNP58546 118 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 UFM1P61960 85 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 FAPQ12884 760 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 MXD4Q14582 209 aaPredicted RBP16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 ARHGAP36Q6ZRI8 547 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 BNIPLQ7Z465 357 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 CCDC190Q86UF4 302 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 C1orf127Q8N9H9 656 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 CENPIQ92674 756 aaPredicted RBP16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 ISG20Q96AZ6 181 aaKnown RBP16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 Q96MT0 163 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 KIFC1Q9BW19 673 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 TMEM134Q9H6X4 195 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 TMEM39AQ9NV64 488 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 SETD4Q9NVD3 440 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 LOC100506127A0A0U1RQW1 187 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 CYBBP04839 570 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 IL12RB1P42701 662 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 NKX3-2P78367 333 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 EIF2B5Q13144 721 aaKnown RBP16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 XKR3Q5GH77 459 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 ZPBP2Q6X784 338 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 SH3KBP1Q96B97 665 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 TRNT1Q96Q11 434 aaKnown RBP16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 TRMOQ9BU70 441 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 PTPRHQ9HD43 1115 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 LYVE1Q9Y5Y7 322 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 PNMA8CA0A1B0GUJ8 204 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 M0R082 166 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 CDK14O94921 469 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 EPN2O95208 641 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 CPB1P15086 417 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 CTSKP43235 329 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 STK11Q15831 433 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 AGAP9Q5VTM2 703 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 SLC22A9Q8IVM8 553 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 CNTN4Q8IWV2 1026 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 OR4M2Q8NGB6 313 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 TMCO6Q96DC7 493 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 MID1IP1Q9NPA3 183 aa16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 PXMP2Q9NR77 195 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms