RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 AK5Q9Y6K8 562 aa11.6□□□□□ -0.55
VTA1-203ENST00000452973 TXNDC9O14530 226 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 XYLBO75191 536 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 C1SP09871 688 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 UBTFL6P0CB48 400 aaPredicted RBP11.59□□□□□ -0.55
VTA1-203ENST00000452973 NNMTP40261 264 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 UFM1P61960 85 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 GPR33Q49SQ1 333 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 SFT2D3Q587I9 215 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 Q6ZVL8 140 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 MILR1Q7Z6M3 343 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 IFNEQ86WN2 208 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 MTFMTQ96DP5 389 aaKnown RBP11.59□□□□□ -0.55
VTA1-203ENST00000452973 LRRC3BQ96PB8 259 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 LRCH1Q9Y2L9 728 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 NDUFAF1Q9Y375 327 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 TRBV5-4A0A0C4DH59 114 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 CD9P21926 228 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 XPAP23025 273 aaPredicted RBP11.59□□□□□ -0.55
VTA1-203ENST00000452973 HMOX2P30519 316 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 NSG1P42857 185 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 AQP4P55087 323 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 B4GALNT1Q00973 533 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 NR6A1Q15406 480 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 GPRC6AQ5T6X5 926 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 BEND7Q8N7W2 519 aaPredicted RBP11.59□□□□□ -0.55
VTA1-203ENST00000452973 PCYOX1LQ8NBM8 494 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 DNAJB14Q8TBM8 379 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 ECHDC3Q96DC8 303 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 LRGUKQ96M69 825 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 KLHL4Q9C0H6 718 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 EBF3Q9H4W6 596 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 ZNHIT2Q9UHR6 403 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 ERVW-1Q9UQF0 538 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 OR7A17O14581 309 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 TAPBPO15533 448 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 IDO1P14902 403 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 VCLP18206 1134 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 RPS3P23396 243 aaKnown RBP eCLIP11.59□□□□□ -0.55
VTA1-203ENST00000452973 CCR7P32248 378 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 ETV3P41162 512 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 KLC1Q07866 573 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 ZNF77Q15935 545 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 AAK1Q2M2I8 961 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 ATP6AP1LQ52LC2 224 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 FAM109BQ6ICB4 259 aaPredicted RBP11.59□□□□□ -0.55
VTA1-203ENST00000452973 SERPINA13PQ6UXR4 307 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 ISG20Q96AZ6 181 aaKnown RBP11.59□□□□□ -0.55
VTA1-203ENST00000452973 TUBGCP5Q96RT8 1024 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 PIF1Q9H611 641 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 MRGBPQ9NV56 204 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 ZDHHC3Q9NYG2 299 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 MAP10Q9P2G4 905 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 EPS15L1Q9UBC2 864 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 OPTCQ9UBM4 332 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 CIDEBQ9UHD4 219 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 EGFL7Q9UHF1 273 aa11.59□□□□□ -0.55
VTA1-203ENST00000452973 OR2AG2A6NM03 316 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 SPINT3P49223 89 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 ACADVLP49748 655 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 MESP2Q0VG99 397 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 TRIM25Q14258 630 aaKnown RBP11.58□□□□□ -0.56
VTA1-203ENST00000452973 ISLR2Q6UXK2 745 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 HSD11B1LQ7Z5J1 315 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 PQLC1Q8N2U9 271 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 PDLIM5Q96HC4 596 aaKnown RBP11.58□□□□□ -0.56
VTA1-203ENST00000452973 ZDHHC4Q9NPG8 344 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 SDR39U1Q9NRG7 319 aaPredicted RBP11.58□□□□□ -0.56
VTA1-203ENST00000452973 FARSBQ9NSD9 589 aaKnown RBP11.58□□□□□ -0.56
VTA1-203ENST00000452973 ARL15Q9NXU5 204 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 TBC1D14Q9P2M4 693 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 TNPO3Q9Y5L0 923 aaKnown RBP11.58□□□□□ -0.56
VTA1-203ENST00000452973 SZT2Q5T011 3432 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 ACOT8O14734 319 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 BCAS2O75934 225 aaPredicted RBP11.58□□□□□ -0.56
VTA1-203ENST00000452973 KCNK10P57789 538 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 POLR2LP62875 67 aaKnown RBP11.58□□□□□ -0.56
VTA1-203ENST00000452973 ABRAXAS2Q15018 415 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 CRY1Q16526 586 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 TTLL9Q3SXZ7 439 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 TIGD2Q4W5G0 525 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 SLC44A4Q53GD3 710 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 C6orf136Q5SQH8 315 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 LYPLAL1Q5VWZ2 237 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 TMEM154Q6P9G4 183 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 MACC1Q6ZN28 852 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 Q6ZSR9 355 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 CBARPQ8N350 705 aaPredicted RBP11.58□□□□□ -0.56
VTA1-203ENST00000452973 PYCR2Q96C36 320 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 SPDL1Q96EA4 605 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 ZNF641Q96N77 438 aaPredicted RBP11.58□□□□□ -0.56
VTA1-203ENST00000452973 ZNF382Q96SR6 550 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 HEPHQ9BQS7 1158 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 C1QTNF3Q9BXJ4 246 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 CPEB1Q9BZB8 566 aaKnown RBP11.58□□□□□ -0.56
VTA1-203ENST00000452973 SEMA6AQ9H2E6 1030 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 PRM3Q9NNZ6 103 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 KLQ9UEF7 1012 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 BCAP29Q9UHQ4 241 aa11.58□□□□□ -0.56
VTA1-203ENST00000452973 PSMD13Q9UNM6 376 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms