RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CFAP61Q8NHU2 1237 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 ASB11Q8WXH4 323 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 USP7Q93009 1102 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 C19orf60Q96EN9 201 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 TSPAN17Q96FV3 270 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 CATSPER2Q96P56 530 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 OR4K3Q96R72 315 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 NKX2-4Q9H2Z4 354 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 NSUN3Q9H649 340 aaKnown RBP6.48□□□□□ -1.37
USP46-202ENST00000451218 CACNA2D2Q9NY47 1150 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 OBP2AQ9NY56 170 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 VTI1BQ9UEU0 232 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 EIF2B4Q9UI10 523 aaKnown RBP6.48□□□□□ -1.37
USP46-202ENST00000451218 CD84Q9UIB8 345 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 CROCCQ5TZA2 2017 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 CTSCP53634 463 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 OXLD1Q5BKU9 147 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 TMC5Q6UXY8 1006 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 ZNF551Q7Z340 670 aaPredicted RBP6.48□□□□□ -1.37
USP46-202ENST00000451218 ZNF354CQ86Y25 554 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 NSMCE1Q8WV22 266 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 TWIST2Q8WVJ9 160 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 ZNF382Q96SR6 550 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 EBF3Q9H4W6 596 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 FARSBQ9NSD9 589 aaKnown RBP6.48□□□□□ -1.37
USP46-202ENST00000451218 TMEM181Q9P2C4 612 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 KLHL42Q9P2K6 505 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 PRKAG2Q9UGJ0 569 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 LSM7Q9UK45 103 aaKnown RBP6.48□□□□□ -1.37
USP46-202ENST00000451218 PDE10AQ9Y233 779 aa6.48□□□□□ -1.37
USP46-202ENST00000451218 COL27A1Q8IZC6 1860 aaPredicted RBP6.47□□□□□ -1.37
USP46-202ENST00000451218 SLC5A10A0PJK1 596 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 ANHXE9PGG2 379 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 NUAK1O60285 661 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 HSPA4LO95757 839 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 IGSF6O95976 241 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 THOP1P52888 689 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 TTC31Q49AM3 519 aaPredicted RBP6.47□□□□□ -1.37
USP46-202ENST00000451218 HPS6Q86YV9 775 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 SLC22A9Q8IVM8 553 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 MSRB3Q8IXL7 192 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 TRMOQ9BU70 441 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 MTIF3Q9H2K0 278 aaKnown RBP6.47□□□□□ -1.37
USP46-202ENST00000451218 ZDHHC6Q9H6R6 413 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 ZDHHC4Q9NPG8 344 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 TAS2R13Q9NYV9 303 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 LRRC42Q9Y546 428 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 TMEM131Q92545 1883 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 TRBV5-3A0A0A0MS03 114 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 SERTM1A2A2V5 107 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 B2RBV5 119 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 PRMT5O14744 637 aaPredicted RBP6.47□□□□□ -1.37
USP46-202ENST00000451218 DIAPH2O60879 1101 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 POP4O95707 220 aaKnown RBP6.47□□□□□ -1.37
USP46-202ENST00000451218 ESRRBO95718 433 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 IL12RB1P42701 662 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 DIO3P55073 304 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 PFN3P60673 137 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 ATP6V0D1P61421 351 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 LCP2Q13094 533 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 CMPK2Q5EBM0 449 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 SWT1Q5T5J6 900 aaKnown RBP6.47□□□□□ -1.37
USP46-202ENST00000451218 PARM1Q6UWI2 310 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 DSELQ8IZU8 1212 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 BEND7Q8N7W2 519 aaPredicted RBP6.47□□□□□ -1.37
USP46-202ENST00000451218 TTC16Q8NEE8 873 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 P2RY13Q9BPV8 354 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 SYNPO2LQ9H987 977 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 SLC6A13Q9NSD5 602 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 SLAMF8Q9P0V8 285 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 POMPQ9Y244 141 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 HEATR5BQ9P2D3 2071 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 NEMP1O14524 444 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 MAPK8P45983 427 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 PHC1P78364 1004 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 RCAN2Q14206 197 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 ZNF234Q14588 700 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 GPR33Q49SQ1 333 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 ZNF805Q5CZA5 627 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 AGBL4Q5VU57 503 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 ANKRD54Q6NXT1 300 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 CERS6Q6ZMG9 384 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 NET1Q7Z628 596 aaPredicted RBP6.47□□□□□ -1.37
USP46-202ENST00000451218 PROKR1Q8TCW9 393 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 SMARCD2Q92925 531 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 SFXN1Q9H9B4 322 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 ZDHHC3Q9NYG2 299 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 IL36AQ9UHA7 158 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 COLQQ9Y215 455 aaPredicted RBP6.47□□□□□ -1.37
USP46-202ENST00000451218 PCDHB1Q9Y5F3 818 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 NUMA1Q14980 2115 aa6.47□□□□□ -1.37
USP46-202ENST00000451218 PRORSD1PA6NEY8 169 aa6.46□□□□□ -1.37
USP46-202ENST00000451218 C16orf96A6NNT2 1141 aa6.46□□□□□ -1.37
USP46-202ENST00000451218 F8W8V4 182 aa6.46□□□□□ -1.37
USP46-202ENST00000451218 ADAM23O75077 832 aa6.46□□□□□ -1.37
USP46-202ENST00000451218 MTX2O75431 263 aa6.46□□□□□ -1.37
USP46-202ENST00000451218 PSIP1O75475 530 aaKnown RBP6.46□□□□□ -1.37
USP46-202ENST00000451218 ADSLP30566 484 aaPredicted RBP6.46□□□□□ -1.37
USP46-202ENST00000451218 VIPR1P32241 457 aa6.46□□□□□ -1.37
USP46-202ENST00000451218 GZMMP51124 257 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms