RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 EPS8L1Q8TE68 723 aa12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 CPLX3Q8WVH0 158 aa12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 TEKT4Q8WW24 435 aa12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 CPA5Q8WXQ8 436 aa12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 TREX2Q9BQ50 279 aaPredicted RBP12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 TRIM56Q9BRZ2 755 aaKnown RBP12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 TMEM121Q9BTD3 319 aa12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 OR2AG1Q9H205 316 aa12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 SYTL2Q9HCH5 934 aa12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 GPAMQ9HCL2 828 aa12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 HRASLS2Q9NWW9 162 aa12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 BTRCQ9Y297 605 aa12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 ADGRG1Q9Y653 693 aa12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 ZNF469Q96JG9 3925 aaPredicted RBP12.25□□□□□ -0.45
AC004540.1-204ENST00000449537 SLC9B1P1A6NJY1 282 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 FADS2P1A8MWK0 482 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 GOLGA6L19H0YKK7 550 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 DFFAO00273 331 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 KMOO15229 486 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 DDX3YO15523 660 aaKnown RBP12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 DEKP35659 375 aaKnown RBP12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 HSPA9P38646 679 aaKnown RBP12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 DRG2P55039 364 aaKnown RBP12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 TPI1P60174 286 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 LONRF1Q17RB8 773 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 PLA2G4EQ3MJ16 856 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 AGAP9Q5VTM2 703 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 CRTC3Q6UUV7 619 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 ARHGAP36Q6ZRI8 547 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 RAVER1Q8IY67 606 aaKnown RBP12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 LRRN4CLQ8ND94 238 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 OR2Y1Q8NGV0 311 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 OR1L3Q8NH93 324 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 JOSD2Q8TAC2 188 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 NRGNQ92686 78 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 SMIM14Q96QK8 99 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 LMF1Q96S06 567 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 TLR10Q9BXR5 811 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 FAM83DQ9H4H8 585 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 TRIM39Q9HCM9 518 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 CCM2LQ9NUG4 571 aaPredicted RBP12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 GPATCH2LQ9NWQ4 482 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 TRIM10Q9UDY6 481 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 NBEAL1Q6ZS30 2694 aa12.24□□□□□ -0.45
AC004540.1-204ENST00000449537 ANKRD12Q6UB98 2062 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 COL6A5A8TX70 2615 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 OR5K3A6NET4 321 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 GPR89AB7ZAQ6 455 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 TMEM150CB9EJG8 249 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 LSM8O95777 96 aaKnown RBP12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 PDHA1P08559 390 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 GPR89BP0CG08 455 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 HTR7P34969 479 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 RFC1P35251 1148 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 HALP42357 657 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 FOLH1Q04609 750 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 ZNF648Q5T619 568 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 ZNF385CQ66K41 422 aaPredicted RBP12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 ARMC6Q6NXE6 501 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 ISLR2Q6UXK2 745 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 TMEM200AQ86VY9 491 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 FAM71AQ8IYT1 594 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 CARFQ8N187 725 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 NINJ1Q92982 152 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 ZNF599Q96NL3 588 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 WDR24Q96S15 920 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 NDC1Q9BTX1 674 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 GRPEL1Q9HAV7 217 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 ARFGAP3Q9NP61 516 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 SLC6A20Q9NP91 592 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 DNAJC12Q9UKB3 198 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 FZD10Q9ULW2 581 aa12.23□□□□□ -0.45
AC004540.1-204ENST00000449537 CCDC66A2RUB6 948 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 CHUKO15111 745 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 ZNF749O43361 778 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 VEGFDO43915 354 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 SLC19A2O60779 497 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 SLC25A14O95258 325 aaPredicted RBP12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 CLDN7O95471 211 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 CRYABP02511 175 aaKnown RBP12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 PNMA6AP0CW24 399 aaPredicted RBP12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 MST1P26927 711 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 PREPP48147 710 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 EPHB1P54762 984 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 STX17P56962 302 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 INAQ16352 499 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 C3AR1Q16581 482 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 ZNF789Q5FWF6 425 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 RALGPS1Q5JS13 557 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 CDKAL1Q5VV42 579 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 TAF3Q5VWG9 929 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 NAA35Q5VZE5 725 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 TMEM198Q66K66 360 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 FBXO38Q6PIJ6 1188 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 GBP6Q6ZN66 633 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 LINC00696Q6ZRV3 163 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 LRRTM4Q86VH4 590 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 PGBD5Q8N414 524 aa12.22□□□□□ -0.45
AC004540.1-204ENST00000449537 DNAJB8Q8NHS0 232 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms